RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.53□□□□□ -1.68
USP16-205ENST00000474835 ZMYND8Q9ULU4 1186 aaPredicted RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 SAMM50Q9Y512 469 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 ADGRA3Q8IWK6 1321 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 SSC5DA1L4H1 1573 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 USP34Q70CQ2 3546 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 KANSL1LA0AUZ9 987 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 H7C1D1 291 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 MTA2O94776 668 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 FGAP02671 866 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 PABPC4LP0CB38 370 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 TCP1P17987 556 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 CTNNA2P26232 953 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 ALDH3A1P30838 453 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 YARSP54577 528 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 SARNPP82979 210 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 SEPT2Q15019 361 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 CNGA2Q16280 664 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 HSF5Q4G112 596 aaPredicted RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 CCDC102BQ68D86 513 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 AACSQ86V21 672 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 EHBP1Q8NDI1 1231 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 RNF25Q96BH1 459 aaPredicted RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 HVCN1Q96D96 273 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 DTNBP1Q96EV8 351 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 SPAG5Q96R06 1193 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 CSRNP2Q9H175 543 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 CNOT10Q9H9A5 744 aaKnown RBP4.53□□□□□ -1.68
USP16-205ENST00000474835 AGPAT5Q9NUQ2 364 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.53□□□□□ -1.681e-6■■■■□ 22.7
USP16-205ENST00000474835 TFR2Q9UP52 801 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 PCDHB6Q9Y5E3 794 aa4.53□□□□□ -1.68
USP16-205ENST00000474835 BECN2A8MW95 431 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 PES1O00541 588 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 DNAJC6O75061 913 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 PYGLP06737 847 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 KCNJ2P63252 427 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 SNX1Q13596 522 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 TTF1Q15361 905 aaPredicted RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 DLGAP5Q15398 846 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 CCDC38Q502W7 563 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 THEMIS2Q5TEJ8 643 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 ARL6IP4Q66PJ3 421 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 KBTBD2Q8IY47 623 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 CRACR2BQ8N4Y2 399 aaPredicted RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 DIS3LQ8TF46 1054 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 TMEM87BQ96K49 555 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 XPO6Q96QU8 1125 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 C7orf25Q9BPX7 421 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 DHRS4Q9BTZ2 278 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 CCSER1Q9C0I3 900 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 DMAP1Q9NPF5 467 aaPredicted RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 KRT82Q9NSB4 513 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 SSX2IPQ9Y2D8 614 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 MAP3K2Q9Y2U5 619 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 A0A1B0GUA9 196 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 PALM3A6NDB9 673 aaPredicted RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 ZSCAN5CA6NGD5 496 aaPredicted RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 GTPBP6O43824 516 aaPredicted RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 C1QAP02745 245 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 ADD2P35612 726 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 APOFQ13790 326 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 NFIL3Q16649 462 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 IRGCQ6NXR0 463 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 RNF111Q6ZNA4 994 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 IRF2BP2Q7Z5L9 587 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 SLC15A3Q8IY34 581 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 SNRNP27Q8WVK2 155 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 ARHGEF1Q92888 912 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 FERMT2Q96AC1 680 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 SLC2A11Q9BYW1 496 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 RNPEPL1Q9HAU8 725 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 SIX2Q9NPC8 291 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 LZTFL1Q9NQ48 299 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 FAM114A2Q9NRY5 505 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 CYP39A1Q9NYL5 469 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 DACH1Q9UI36 760 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 L3MBTL1Q9Y468 752 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 PFASO15067 1338 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 CNTNAP5Q8WYK1 1306 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 BRCA1P38398 1863 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 GBF1Q92538 1859 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 UTRNP46939 3433 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 CCDC166P0CW27 439 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 ME1P48163 572 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 TFCP2Q12800 502 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 SFSWAPQ12872 951 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 GSTA3Q16772 222 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 RILPL1Q5EBL4 403 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 FBXO31Q5XUX0 539 aaPredicted RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 MICALCLQ6ZW33 695 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 DZIP3Q86Y13 1208 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 SPICE1Q8N0Z3 855 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 FITM2Q8N6M3 262 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 GPATCH11Q8N954 259 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 NOC3LQ8WTT2 800 aaKnown RBP4.52□□□□□ -1.69
USP16-205ENST00000474835 TSPAN18Q96SJ8 248 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 MIPEPQ99797 713 aa4.52□□□□□ -1.69
USP16-205ENST00000474835 DBNDD2Q9BQY9 259 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms