RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 POTEMA6NI47 508 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 SMC2O95347 1197 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 SNAI1O95863 264 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-206ENST00000474564 HMGCRP04035 888 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 AKR1A1P14550 325 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 KCNA2P16389 499 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 RPA1P27694 616 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 NDUFA8P51970 172 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 GSE1Q14687 1217 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 IL17AQ16552 155 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 CCDC144BQ3MJ40 725 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 CELF3Q5SZQ8 465 aaKnown RBP11.59□□□□□ -0.55
COL12A1-206ENST00000474564 CCDC183Q5T5S1 534 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 SV2BQ7L1I2 683 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 SEPT1Q8WYJ6 367 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 DHX58Q96C10 678 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 FGD4Q96M96 766 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 SPATA33Q96N06 139 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 EIF2AK1Q9BQI3 630 aaKnown RBP11.59□□□□□ -0.55
COL12A1-206ENST00000474564 PANK2Q9BZ23 570 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 ARHGAP39Q9C0H5 1083 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 UNC45AQ9H3U1 944 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 Q9Y3F1 56 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 ASTN1O14525 1302 aa11.59□□□□□ -0.55
COL12A1-206ENST00000474564 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.55
COL12A1-206ENST00000474564 ZNF236Q9UL36 1845 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 FAM237AA0A1B0GTK4 181 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 ZEB2O60315 1214 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 KPNA6O60684 536 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 ATP9AO75110 1047 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 RGS20O76081 388 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 MYL1P05976 194 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 SLFN14P0C7P3 912 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 XRCC6P12956 609 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL12A1-206ENST00000474564 UBA1P22314 1058 aaKnown RBP11.58□□□□□ -0.56
COL12A1-206ENST00000474564 CYP2C19P33261 490 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 QARSP47897 775 aaKnown RBP11.58□□□□□ -0.56
COL12A1-206ENST00000474564 CTCFP49711 727 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-206ENST00000474564 ACTR2P61160 394 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 PSMC5P62195 406 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 SP4Q02446 784 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 LY6KQ17RY6 165 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 DUSP28Q4G0W2 176 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 EXOC8Q8IYI6 725 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 DNAJC5GQ8N7S2 189 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 OR6J1Q8NGC5 347 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 NRBP2Q9NSY0 501 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 VAV3Q9UKW4 847 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 GABRQQ9UN88 632 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 KIAA1024Q9UPX6 916 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 SMCHD1A6NHR9 2005 aa11.58□□□□□ -0.56
COL12A1-206ENST00000474564 THSD7BQ9C0I4 1608 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 DHX15O43143 795 aaKnown RBP11.57□□□□□ -0.56
COL12A1-206ENST00000474564 MSCO60682 206 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 PPFIA4O75335 1185 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 NR1I2O75469 434 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 SSBP05455 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL12A1-206ENST00000474564 KRT18P05783 430 aaKnown RBP11.57□□□□□ -0.56
COL12A1-206ENST00000474564 RARBP10826 455 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 LIG1P18858 919 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 CDC25AP30304 524 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 GRK4P32298 578 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 ADCYAP1R1P41586 468 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 CPT1AP50416 773 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 SLC26A2P50443 739 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 GRIN1Q05586 938 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 ITGB3BPQ13352 177 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-206ENST00000474564 KARSQ15046 597 aaKnown RBP11.57□□□□□ -0.56
COL12A1-206ENST00000474564 CCL14Q16627 93 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 SWSAP1Q6NVH7 229 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 TAPT1Q6NXT6 567 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 CCDC62Q6P9F0 684 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 KRBA2Q6ZNG9 492 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 ELOA2Q8IYF1 753 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-206ENST00000474564 FMR1NBQ8N0W7 255 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-206ENST00000474564 GPT2Q8TD30 523 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 GLG1Q92896 1179 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 GJA10Q969M2 543 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 DYDC2Q96IM9 177 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 FAM167AQ96KS9 214 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 GTPBP4Q9BZE4 634 aaKnown RBP11.57□□□□□ -0.56
COL12A1-206ENST00000474564 SMARCAD1Q9H4L7 1026 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 ZNF302Q9NR11 478 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 ZNF215Q9UL58 517 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-206ENST00000474564 HPSEQ9Y251 543 aa11.57□□□□□ -0.56
COL12A1-206ENST00000474564 PP2D1A8MPX8 630 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 DYNC1LI2O43237 492 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-206ENST00000474564 FARP2O94887 1054 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-206ENST00000474564 SUPT20HL2P0C7V6 817 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 PLCG1P19174 1290 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 CTGFP29279 349 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 STAT5BP51692 787 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 CYP4A11Q02928 519 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 SPIRE1Q08AE8 756 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 PKN2Q16513 984 aaKnown RBP11.56□□□□□ -0.56
COL12A1-206ENST00000474564 DGKDQ16760 1214 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 PRAMEF19Q5SWL8 479 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 HYIQ5T013 277 aa11.56□□□□□ -0.56
COL12A1-206ENST00000474564 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms