RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 SEPT8Q92599 483 aa12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 TGS1Q96RS0 853 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 EHMT1Q9H9B1 1298 aa12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 RBM28Q9NW13 759 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 LMCD1Q9NZU5 365 aa12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 PCDHA6Q9UN73 950 aa12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 TELO2Q9Y4R8 837 aa12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 INSL6Q9Y581 213 aa12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 PCDHA8Q9Y5H6 950 aa12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 UBIAD1Q9Y5Z9 338 aa12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 NCOR1O75376 2440 aa12.69□□□□□ -0.38
SEMA4D-216ENST00000474258 WDR81Q562E7 1941 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 NRCAMQ92823 1304 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 RALGAPA2Q2PPJ7 1873 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 REV3LO60673 3130 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 LPXNO60711 386 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 ATP9AO75110 1047 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 KCNA2P16389 499 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 ITGB5P18084 799 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 TCF7P36402 384 aaPredicted RBP12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 ERVK-21P61565 698 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 ADAM17P78536 824 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 ARHGAP4P98171 946 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 EXOSC10Q01780 885 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 MKRN4PQ13434 485 aaPredicted RBP12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 MTMR1Q13613 665 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 TSGA10IPQ3SY00 556 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 KRT40Q6A162 431 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 FAM117BQ6P1L5 589 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 APOA5Q6Q788 366 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 SPRED2Q7Z698 418 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 MYOCDQ8IZQ8 938 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 ADAMTS19Q8TE59 1207 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 LMBR1Q8WVP7 490 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 JADE2Q9NQC1 790 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 COG5Q9UP83 839 aa12.68□□□□□ -0.38
SEMA4D-216ENST00000474258 TRANK1O15050 2925 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 GSTTP1A0A1W2PQM5 241 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 LINC01553A4QN01 128 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 ZBTB43O43298 467 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 CTSHP09668 335 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 KRT32Q14532 448 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 RTN1Q16799 776 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 FAM26DQ5JW98 314 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 TEX2Q8IWB9 1127 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 APBB2Q92870 758 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 UHRF1Q96T88 793 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 SMARCAD1Q9H4L7 1026 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 SUGCTQ9HAC7 445 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 ERAP1Q9NZ08 941 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 TTC3P53804 2025 aa12.67□□□□□ -0.38
SEMA4D-216ENST00000474258 CNTNAP5Q8WYK1 1306 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 CDC45O75419 566 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 FOSP01100 380 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 BMP1P13497 986 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 NAPAP54920 295 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 HTRA4P83105 476 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 TFF2Q03403 129 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 WWC2Q6AWC2 1192 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 TAF2Q6P1X5 1199 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 RPAINQ86UA6 219 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 GDPD5Q8WTR4 605 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 GLG1Q92896 1179 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 TOP1MTQ969P6 601 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 TCEANC2Q96MN5 208 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 MXRA8Q9BRK3 442 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 OSBPL7Q9BZF2 842 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 MTUS1Q9ULD2 1270 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 BRPF3Q9ULD4 1205 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 TTC28Q96AY4 2481 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 BRWD1Q9NSI6 2320 aa12.66□□□□□ -0.38
SEMA4D-216ENST00000474258 RBAK-RBAKDNI3L0D1 243 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 MARK3P27448 753 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 PPFIA1Q13136 1202 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 ADCK5Q3MIX3 580 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 RSPH3Q86UC2 560 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 TNPO1Q92973 898 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 HLA-CQ95604 372 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 IFIH1Q9BYX4 1025 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 GLT8D2Q9H1C3 349 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 KCNH7Q9NS40 1196 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 PKD2L1Q9P0L9 805 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 SLC9A2Q9UBY0 812 aa12.65□□□□□ -0.38
SEMA4D-216ENST00000474258 NFASCO94856 1347 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 SPTBN5Q9NRC6 3674 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 KLF18A0A0U1RQI7 1052 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 MBLAC1A4D2B0 266 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 SMCO2A6NFE2 343 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 RRN3P2A6NIE6 340 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 GOLGA8AA7E2F4 631 aa12.64□□□□□ -0.39
SEMA4D-216ENST00000474258 GOLGA8BA8MQT2 603 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms