RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 RCOR1Q9UKL0 485 aa11.72□□□□□ -0.53
CASC3-204ENST00000474190 NOL7Q9UMY1 257 aaKnown RBP11.72□□□□□ -0.53
CASC3-204ENST00000474190 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.53
CASC3-204ENST00000474190 POTEMA6NI47 508 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 PP2D1A8MPX8 630 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
CASC3-204ENST00000474190 ZNF862O60290 1169 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 SGPL1O95470 568 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 SPATA31C1P0DKV0 1188 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 RARBP10826 455 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 COL6A1P12109 1028 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 MARCKSP29966 332 aaPredicted RBP11.71□□□□□ -0.53
CASC3-204ENST00000474190 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.533e-6■■□□□ 14.2
CASC3-204ENST00000474190 CEBPZQ03701 1054 aaKnown RBP11.71□□□□□ -0.53
CASC3-204ENST00000474190 LAMC2Q13753 1193 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 HIC1Q14526 733 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 LRCH2Q5VUJ6 765 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 CLEC17AQ6ZS10 378 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 USP49Q70CQ1 688 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 CCDC60Q8IWA6 550 aaPredicted RBP11.71□□□□□ -0.53
CASC3-204ENST00000474190 DHX37Q8IY37 1157 aaKnown RBP11.71□□□□□ -0.53
CASC3-204ENST00000474190 OR6J1Q8NGC5 347 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 SPATA33Q96N06 139 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 HSD17B14Q9BPX1 270 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 XPNPEP3Q9NQH7 507 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 TBC1D22BQ9NU19 505 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 SLC9A2Q9UBY0 812 aa11.71□□□□□ -0.53
CASC3-204ENST00000474190 HAS3O00219 553 aa11.7□□□□□ -0.54
CASC3-204ENST00000474190 MSCO60682 206 aa11.7□□□□□ -0.54
CASC3-204ENST00000474190 YEATS4O95619 227 aa11.7□□□□□ -0.54
CASC3-204ENST00000474190 CDC25AP30304 524 aa11.7□□□□□ -0.54
CASC3-204ENST00000474190 TXKP42681 527 aa11.7□□□□□ -0.54
CASC3-204ENST00000474190 PURAQ00577 322 aaKnown RBP11.7□□□□□ -0.54
CASC3-204ENST00000474190 FSCN1Q16658 493 aaKnown RBP11.7□□□□□ -0.54
CASC3-204ENST00000474190 ARL6IP4Q66PJ3 421 aaKnown RBP11.7□□□□□ -0.54
CASC3-204ENST00000474190 ZNF746Q6NUN9 644 aaPredicted RBP11.7□□□□□ -0.54
CASC3-204ENST00000474190 DIS3LQ8TF46 1054 aaKnown RBP11.7□□□□□ -0.54
CASC3-204ENST00000474190 LEO1Q8WVC0 666 aaPredicted RBP11.7□□□□□ -0.54
CASC3-204ENST00000474190 CLIC6Q96NY7 704 aa11.7□□□□□ -0.54
CASC3-204ENST00000474190 TTC12Q9H892 705 aaPredicted RBP11.7□□□□□ -0.54
CASC3-204ENST00000474190 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
CASC3-204ENST00000474190 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
CASC3-204ENST00000474190 TRIOBPQ9H2D6 2365 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 ELP1O95163 1332 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 IGSF9BQ9UPX0 1349 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 RBAK-RBAKDNI3L0D1 243 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 LAD1O00515 517 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 GAS7O60861 476 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 PPFIA4O75335 1185 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 SLITRK3O94933 977 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 F2P00734 622 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 LGALS2P05162 132 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 SUPT20HL2P0C7V6 817 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 HOXC8P31273 242 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 TECP42680 631 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 SP4Q02446 784 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 KCNA10Q16322 511 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 SLFN12Q8IYM2 578 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 GIMAP8Q8ND71 665 aaPredicted RBP11.69□□□□□ -0.54
CASC3-204ENST00000474190 SEPT1Q8WYJ6 367 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 CTAGE1Q96RT6 745 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 CEP89Q96ST8 783 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 TEKT3Q9BXF9 490 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 MLXIPQ9HAP2 919 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 GDPD2Q9HCC8 539 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 RGL1Q9NZL6 768 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 PHF24Q9UPV7 400 aa11.69□□□□□ -0.54
CASC3-204ENST00000474190 MAFBQ9Y5Q3 323 aaPredicted RBP11.69□□□□□ -0.54
CASC3-204ENST00000474190 RANBP2P49792 3224 aaKnown RBP11.69□□□□□ -0.54
CASC3-204ENST00000474190 KIAA1217Q5T5P2 1943 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 A0A087X0B3 334 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 ZBTB42B2RXF5 422 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 ZBTB39O15060 712 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 CHMP2AO43633 222 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 PPP6R2O75170 966 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 MED24O75448 989 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 C6orf222P0C671 652 aaPredicted RBP11.68□□□□□ -0.54
CASC3-204ENST00000474190 ZNF286BP0CG31 522 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 EN2P19622 333 aaPredicted RBP11.68□□□□□ -0.54
CASC3-204ENST00000474190 TCF7P36402 384 aaPredicted RBP11.68□□□□□ -0.54
CASC3-204ENST00000474190 KRT76Q01546 638 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 PDIA5Q14554 519 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 SHC4Q6S5L8 630 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 CXCL17Q6UXB2 119 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 SLC43A3Q8NBI5 491 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 AFAP1L1Q8TED9 768 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 PPP1R13LQ8WUF5 828 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 ZNF396Q96N95 335 aaPredicted RBP11.68□□□□□ -0.54
CASC3-204ENST00000474190 PNMA5Q96PV4 448 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 SDF4Q9BRK5 362 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 CSRNP2Q9H175 543 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 DISC1Q9NRI5 854 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 PCDHA7Q9UN72 937 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 PCDHA12Q9UN75 941 aa11.68□□□□□ -0.54
CASC3-204ENST00000474190 EMSYQ7Z589 1322 aa11.67□□□□□ -0.54
CASC3-204ENST00000474190 TMEM150BA6NC51 233 aa11.67□□□□□ -0.54
CASC3-204ENST00000474190 VWA3AA6NCI4 1184 aa11.67□□□□□ -0.54
CASC3-204ENST00000474190 WDR64B1ANS9 1081 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms