RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 RB1P06400 928 aa23.35■■□□□ 1.33
APP-215ENST00000474136 SLC35G1Q2M3R5 365 aa23.35■■□□□ 1.33
APP-215ENST00000474136 FAM26DQ5JW98 314 aa23.35■■□□□ 1.33
APP-215ENST00000474136 C11orf84Q9BUA3 381 aaPredicted RBP23.35■■□□□ 1.33
APP-215ENST00000474136 NLRC5Q86WI3 1866 aa23.35■■□□□ 1.33
APP-215ENST00000474136 TECTAO75443 2155 aa23.35■■□□□ 1.33
APP-215ENST00000474136 MYH6P13533 1939 aa23.35■■□□□ 1.33
APP-215ENST00000474136 CDC45O75419 566 aa23.34■■□□□ 1.33
APP-215ENST00000474136 CHRNA1P02708 482 aa23.34■■□□□ 1.33
APP-215ENST00000474136 MFAP1P55081 439 aaKnown RBP23.34■■□□□ 1.33
APP-215ENST00000474136 ADAM17P78536 824 aa23.34■■□□□ 1.33
APP-215ENST00000474136 CYFIP1Q7L576 1253 aa23.34■■□□□ 1.33
APP-215ENST00000474136 USP26Q9BXU7 913 aa23.34■■□□□ 1.33
APP-215ENST00000474136 LMAN2LQ9H0V9 348 aa23.34■■□□□ 1.33
APP-215ENST00000474136 GCOM1H8Y6P7 765 aaPredicted RBP23.33■■□□□ 1.33
APP-215ENST00000474136 POLR2MP0CAP2 368 aa23.33■■□□□ 1.33
APP-215ENST00000474136 GHRP10912 638 aa23.33■■□□□ 1.33
APP-215ENST00000474136 GNAT1P11488 350 aa23.33■■□□□ 1.33
APP-215ENST00000474136 ARHGAP4P98171 946 aa23.33■■□□□ 1.33
APP-215ENST00000474136 SEMA3FQ13275 785 aa23.33■■□□□ 1.33
APP-215ENST00000474136 SMAD4Q13485 552 aaKnown RBP23.33■■□□□ 1.33
APP-215ENST00000474136 UTP14CQ5TAP6 766 aaKnown RBP23.33■■□□□ 1.33
APP-215ENST00000474136 HOMER1Q86YM7 354 aa23.33■■□□□ 1.33
APP-215ENST00000474136 PRSS33Q8NF86 280 aa23.33■■□□□ 1.33
APP-215ENST00000474136 LMBR1Q8WVP7 490 aa23.33■■□□□ 1.33
APP-215ENST00000474136 POP1Q99575 1024 aaKnown RBP23.33■■□□□ 1.33
APP-215ENST00000474136 GPR20Q99678 358 aa23.33■■□□□ 1.33
APP-215ENST00000474136 RC3H2Q9HBD1 1191 aaKnown RBP23.33■■□□□ 1.33
APP-215ENST00000474136 MAD2L2Q9UI95 211 aa23.33■■□□□ 1.33
APP-215ENST00000474136 ADGRA3Q8IWK6 1321 aa23.33■■□□□ 1.33
APP-215ENST00000474136 ATG2AQ2TAZ0 1938 aa23.33■■□□□ 1.33
APP-215ENST00000474136 STXBP3O00186 592 aa23.33■■□□□ 1.32
APP-215ENST00000474136 NT5C2P49902 561 aa23.33■■□□□ 1.32
APP-215ENST00000474136 MRPS9P82933 396 aaKnown RBP23.33■■□□□ 1.32
APP-215ENST00000474136 IFIT1BQ5T764 474 aaKnown RBP23.33■■□□□ 1.32
APP-215ENST00000474136 ALG13Q9NP73 1137 aaKnown RBP23.33■■□□□ 1.32
APP-215ENST00000474136 CD207Q9UJ71 328 aa23.33■■□□□ 1.32
APP-215ENST00000474136 CAMK1Q14012 370 aa23.32■■□□□ 1.32
APP-215ENST00000474136 IER5LQ5T953 404 aa23.32■■□□□ 1.32
APP-215ENST00000474136 CWC27Q6UX04 472 aaKnown RBP23.32■■□□□ 1.32
APP-215ENST00000474136 METTL7BQ6UX53 244 aa23.32■■□□□ 1.32
APP-215ENST00000474136 RUFY4Q6ZNE9 571 aa23.32■■□□□ 1.32
APP-215ENST00000474136 SAMD3Q8N6K7 520 aa23.32■■□□□ 1.32
APP-215ENST00000474136 EDAQ92838 391 aa23.32■■□□□ 1.32
APP-215ENST00000474136 CLP1Q92989 425 aaKnown RBP23.32■■□□□ 1.32
APP-215ENST00000474136 PIGSQ96S52 555 aa23.32■■□□□ 1.32
APP-215ENST00000474136 UBAC1Q9BSL1 405 aa23.32■■□□□ 1.32
APP-215ENST00000474136 RTEL1Q9NZ71 1219 aa23.32■■□□□ 1.32
APP-215ENST00000474136 RALGAPA2Q2PPJ7 1873 aa23.31■■□□□ 1.32
APP-215ENST00000474136 ICAM3P32942 547 aa23.31■■□□□ 1.32
APP-215ENST00000474136 SP4Q02446 784 aa23.31■■□□□ 1.32
APP-215ENST00000474136 ADAM15Q13444 863 aa23.31■■□□□ 1.32
APP-215ENST00000474136 SNX27Q96L92 541 aa23.31■■□□□ 1.32
APP-215ENST00000474136 INPP4AQ96PE3 977 aaPredicted RBP23.31■■□□□ 1.32
APP-215ENST00000474136 EHMT1Q9H9B1 1298 aa23.31■■□□□ 1.32
APP-215ENST00000474136 RWDD3Q9Y3V2 267 aa23.31■■□□□ 1.32
APP-215ENST00000474136 PALM3A6NDB9 673 aaPredicted RBP23.3■■□□□ 1.32
APP-215ENST00000474136 SPATA31C2B4DYI2 1134 aa23.3■■□□□ 1.32
APP-215ENST00000474136 ENPP3O14638 875 aa23.3■■□□□ 1.32
APP-215ENST00000474136 MMP1P03956 469 aa23.3■■□□□ 1.32
APP-215ENST00000474136 BTG3Q14201 252 aaPredicted RBP23.3■■□□□ 1.32
APP-215ENST00000474136 NEDD9Q14511 834 aa23.3■■□□□ 1.32
APP-215ENST00000474136 LPIN1Q14693 890 aa23.3■■□□□ 1.32
APP-215ENST00000474136 SEC23AQ15436 765 aa23.3■■□□□ 1.32
APP-215ENST00000474136 GNPTABQ3T906 1256 aa23.3■■□□□ 1.32
APP-215ENST00000474136 RUFY2Q8WXA3 655 aa23.3■■□□□ 1.32
APP-215ENST00000474136 ZNF689Q96CS4 500 aaPredicted RBP23.3■■□□□ 1.32
APP-215ENST00000474136 KRT23Q9C075 422 aa23.3■■□□□ 1.32
APP-215ENST00000474136 ZNF215Q9UL58 517 aaPredicted RBP23.3■■□□□ 1.32
APP-215ENST00000474136 DNAJB1P25685 340 aa23.29■■□□□ 1.32
APP-215ENST00000474136 MGAT3Q09327 533 aa23.29■■□□□ 1.32
APP-215ENST00000474136 MSLNLQ96KJ4 702 aa23.29■■□□□ 1.32
APP-215ENST00000474136 PLAGL2Q9UPG8 496 aa23.29■■□□□ 1.32
APP-215ENST00000474136 LAMA4Q16363 1823 aa23.28■■□□□ 1.32
APP-215ENST00000474136 TMEM221A6NGB7 291 aa23.28■■□□□ 1.32
APP-215ENST00000474136 M0R296 226 aa23.28■■□□□ 1.32
APP-215ENST00000474136 NDUFV1P49821 464 aa23.28■■□□□ 1.32
APP-215ENST00000474136 IMMTQ16891 758 aaKnown RBP23.28■■□□□ 1.32
APP-215ENST00000474136 CYB5R4Q7L1T6 521 aa23.28■■□□□ 1.32
APP-215ENST00000474136 ADGRD2Q7Z7M1 963 aa23.28■■□□□ 1.32
APP-215ENST00000474136 DIAPH3Q9NSV4 1193 aa23.28■■□□□ 1.32
APP-215ENST00000474136 FRMPD4Q14CM0 1322 aa23.27■■□□□ 1.32
APP-215ENST00000474136 NRCAMQ92823 1304 aa23.27■■□□□ 1.32
APP-215ENST00000474136 FIBPO43427 364 aa23.27■■□□□ 1.32
APP-215ENST00000474136 CYTH3O43739 400 aa23.27■■□□□ 1.32
APP-215ENST00000474136 TRIM67Q6ZTA4 783 aa23.27■■□□□ 1.32
APP-215ENST00000474136 BMP8AQ7Z5Y6 402 aa23.27■■□□□ 1.32
APP-215ENST00000474136 PBXIP1Q96AQ6 731 aa23.27■■□□□ 1.32
APP-215ENST00000474136 DSCC1Q9BVC3 393 aa23.27■■□□□ 1.32
APP-215ENST00000474136 RIOX1Q9H6W3 641 aa23.27■■□□□ 1.32
APP-215ENST00000474136 CLEC1BQ9P126 229 aa23.27■■□□□ 1.32
APP-215ENST00000474136 MRPL42Q9Y6G3 142 aaKnown RBP23.27■■□□□ 1.32
APP-215ENST00000474136 DGKIO75912 1065 aa23.26■■□□□ 1.31
APP-215ENST00000474136 EYA4O95677 639 aa23.26■■□□□ 1.31
APP-215ENST00000474136 ITGB1P05556 798 aa23.26■■□□□ 1.31
APP-215ENST00000474136 CHMLP26374 656 aa23.26■■□□□ 1.31
APP-215ENST00000474136 C8orf34Q49A92 452 aa23.26■■□□□ 1.31
APP-215ENST00000474136 LINC01599Q8WXQ3 324 aa23.26■■□□□ 1.31
APP-215ENST00000474136 PLVAPQ9BX97 442 aa23.26■■□□□ 1.31
APP-215ENST00000474136 CNNM2Q9H8M5 875 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms