RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 NLRX1Q86UT6 975 aa10.29□□□□□ -0.76
SMG5-203ENST00000473643 PLA2G4DQ86XP0 818 aa10.29□□□□□ -0.76
SMG5-203ENST00000473643 SCFD2Q8WU76 684 aa10.29□□□□□ -0.76
SMG5-203ENST00000473643 CDHR1Q96JP9 859 aa10.29□□□□□ -0.76
SMG5-203ENST00000473643 FAM20AQ96MK3 541 aa10.29□□□□□ -0.76
SMG5-203ENST00000473643 FTOQ9C0B1 505 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMG5-203ENST00000473643 KCNMB3Q9NPA1 279 aa10.29□□□□□ -0.76
SMG5-203ENST00000473643 A6NJR5 290 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 DCDC2CA8MYV0 355 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 SOX1O00570 391 aaPredicted RBP10.28□□□□□ -0.76
SMG5-203ENST00000473643 NKRFO15226 690 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMG5-203ENST00000473643 SPTLC2O15270 562 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 MSH4O15457 936 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 FIBPO43427 364 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 ZEB2O60315 1214 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 NEMFO60524 1076 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
SMG5-203ENST00000473643 OR52Z1P0C646 297 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 ARP10275 920 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 TGFB3P10600 412 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 PRR16Q569H4 304 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 CCDC62Q6P9F0 684 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 KCNV1Q6PIU1 500 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 TMEM87AQ8NBN3 555 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 ETNPPLQ8TBG4 499 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 KCNG4Q8TDN1 519 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 LEO1Q8WVC0 666 aaPredicted RBP10.28□□□□□ -0.76
SMG5-203ENST00000473643 HAS1Q92839 578 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 SLC5A5Q92911 643 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 BADQ92934 168 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 VTI1AQ96AJ9 217 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 CHAMP1Q96JM3 812 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 SENP7Q9BQF6 1050 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 SEZ6LQ9BYH1 1024 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 TMEM60Q9H2L4 133 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 PRDM5Q9NQX1 630 aaPredicted RBP10.28□□□□□ -0.76
SMG5-203ENST00000473643 KCNH7Q9NS40 1196 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 TMEM39AQ9NV64 488 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 GRIN2DO15399 1336 aa10.28□□□□□ -0.76
SMG5-203ENST00000473643 MCM3APO60318 1980 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 A0A0U1RQG5 324 aaPredicted RBP10.27□□□□□ -0.77
SMG5-203ENST00000473643 CD4P01730 458 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 TXNP10599 105 aaKnown RBP10.27□□□□□ -0.77
SMG5-203ENST00000473643 CEBPZQ03701 1054 aaKnown RBP10.27□□□□□ -0.77
SMG5-203ENST00000473643 SEMA3FQ13275 785 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 MTMR1Q13613 665 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 TTLL4Q14679 1199 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 STK38Q15208 465 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 CALCRLQ16602 461 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 POTEDQ86YR6 584 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 FAM126BQ8IXS8 530 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 SLFN12Q8IYM2 578 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 ZFP91Q96JP5 570 aaPredicted RBP10.27□□□□□ -0.77
SMG5-203ENST00000473643 GBP4Q96PP9 640 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 RIT2Q99578 217 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 AGO4Q9HCK5 861 aaKnown RBP10.27□□□□□ -0.77
SMG5-203ENST00000473643 FBXO2Q9UK22 296 aaPredicted RBP10.27□□□□□ -0.77
SMG5-203ENST00000473643 TBX21Q9UL17 535 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 SRPRBQ9Y5M8 271 aaKnown RBP10.27□□□□□ -0.77
SMG5-203ENST00000473643 MROH7Q68CQ1 1323 aa10.27□□□□□ -0.77
SMG5-203ENST00000473643 IPO5O00410 1097 aaKnown RBP10.26□□□□□ -0.77
SMG5-203ENST00000473643 DHX15O43143 795 aaKnown RBP10.26□□□□□ -0.77
SMG5-203ENST00000473643 KPNA6O60684 536 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 ATP9AO75110 1047 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 PSMD10O75832 226 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 ARIH2O95376 493 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 TIMP1P01033 207 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 KCNA2P16389 499 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 NCLP19338 710 aaKnown RBP10.26□□□□□ -0.77
SMG5-203ENST00000473643 CPT1AP50416 773 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 FXR2P51116 673 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMG5-203ENST00000473643 PURAQ00577 322 aaKnown RBP10.26□□□□□ -0.77
SMG5-203ENST00000473643 ITGA7Q13683 1181 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 PDIA5Q14554 519 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 IL17AQ16552 155 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 CSPP1Q1MSJ5 1256 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 AXDND1Q5T1B0 1012 aaPredicted RBP10.26□□□□□ -0.77
SMG5-203ENST00000473643 B3GNT9Q6UX72 402 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 DTHD1Q6ZMT9 781 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
SMG5-203ENST00000473643 GIMAP8Q8ND71 665 aaPredicted RBP10.26□□□□□ -0.77
SMG5-203ENST00000473643 LRCH3Q96II8 777 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 SPATA32Q96LK8 384 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 ZNF577Q9BSK1 485 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 TBC1D22BQ9NU19 505 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 DDX41Q9UJV9 622 aaKnown RBP10.26□□□□□ -0.77
SMG5-203ENST00000473643 NFASCO94856 1347 aa10.26□□□□□ -0.77
SMG5-203ENST00000473643 LCTP09848 1927 aa10.25□□□□□ -0.77
SMG5-203ENST00000473643 CUTAO60888 179 aa10.25□□□□□ -0.77
SMG5-203ENST00000473643 RAG1P15918 1043 aa10.25□□□□□ -0.77
SMG5-203ENST00000473643 MARCKSP29966 332 aaPredicted RBP10.25□□□□□ -0.77
SMG5-203ENST00000473643 TXKP42681 527 aa10.25□□□□□ -0.77
SMG5-203ENST00000473643 EPHB4P54760 987 aa10.25□□□□□ -0.77
SMG5-203ENST00000473643 SP2Q02086 613 aa10.25□□□□□ -0.77
SMG5-203ENST00000473643 SPIRE1Q08AE8 756 aa10.25□□□□□ -0.77
SMG5-203ENST00000473643 ITGB3BPQ13352 177 aaPredicted RBP10.25□□□□□ -0.77
SMG5-203ENST00000473643 NEDD9Q14511 834 aa10.25□□□□□ -0.77
SMG5-203ENST00000473643 SHHQ15465 462 aa10.25□□□□□ -0.77
SMG5-203ENST00000473643 LY6KQ17RY6 165 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms