RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 ESYT2A0FGR8 921 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 FAM86C2PA6NEL3 165 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 SMCO2A6NFE2 343 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 GPR37L1O60883 481 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 PPFIA4O75335 1185 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 IFNAR1P17181 557 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 CHMP4BP1P59074 171 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 AKAP17AQ02040 695 aaKnown RBP14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 AP3B2Q13367 1082 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 BFSP2Q13515 415 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 NTRK3Q16288 839 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 UBE2SQ16763 222 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 MCTP2Q6DN12 878 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 SESTD1Q86VW0 696 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 GIMAP8Q8ND71 665 aaPredicted RBP14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 GPRASP2Q96D09 838 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 SPATA33Q96N06 139 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 SENP7Q9BQF6 1050 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 MLXIPQ9HAP2 919 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 PDRG1Q9NUG6 133 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 PCDHA6Q9UN73 950 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 NOD1Q9Y239 953 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 PCDHA8Q9Y5H6 950 aa14.83□□□□□ -0.04
SHROOM3-204ENST00000473602 LCHNA4D1U4 455 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 MAFGO15525 162 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 BAIAP3O94812 1187 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 F2P00734 622 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 KCNJ6P48051 423 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 SP2Q02086 613 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 METTL7BQ6UX53 244 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 TMCO2Q7Z6W1 182 aaPredicted RBP14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 ZMYND12Q9H0C1 365 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 CD320Q9NPF0 282 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 RTEL1Q9NZ71 1219 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 TANC1Q9C0D5 1861 aa14.82□□□□□ -0.04
SHROOM3-204ENST00000473602 PI4K2BG5E9Z4 385 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 GNA11P29992 359 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 CLK2P49760 499 aaKnown RBP14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 CCT2P78371 535 aaKnown RBP14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 SEMA3FQ13275 785 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 GPNMBQ14956 572 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 ANKRD1Q15327 319 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 PKN1Q16512 942 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 HSDL1Q3SXM5 330 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 CPLX2Q6PUV4 134 aaKnown RBP14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 TRIM22Q8IYM9 498 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 CCDC148Q8NFR7 591 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 GDPD5Q8WTR4 605 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 KAT2BQ92831 832 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 ZFP91Q96JP5 570 aaPredicted RBP14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 ZBED2Q9BTP6 218 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 ANO3Q9BYT9 981 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 C6orf50Q9HD87 102 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 UBIAD1Q9Y5Z9 338 aa14.81□□□□□ -0.04
SHROOM3-204ENST00000473602 MUC6Q6W4X9 2439 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 HAS3O00219 553 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 NOP56O00567 594 aaKnown RBP14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 CPLX1O14810 134 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 ITGB5P18084 799 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 WDR5P61964 334 aaKnown RBP14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 PTGISQ16647 500 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 FAM177A1Q8N128 213 aaPredicted RBP14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 PHKBQ93100 1093 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 SLC26A6Q9BXS9 759 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 SUGCTQ9HAC7 445 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 NCOA5Q9HCD5 579 aaKnown RBP14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 SH3GLB2Q9NR46 395 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 LMCD1Q9NZU5 365 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 SCN5AQ14524 2016 aa14.8□□□□□ -0.04
SHROOM3-204ENST00000473602 SREBF1P36956 1147 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 PSEN2P49810 448 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 DEFB103AP81534 67 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 MTMR1Q13613 665 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 MFSD10Q14728 455 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 CAGE1Q8TC20 777 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 BICD2Q8TD16 824 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 AFAP1L1Q8TED9 768 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 CTAGE1Q96RT6 745 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 JADE2Q9NQC1 790 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 BRWD1Q9NSI6 2320 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 GTF2IRD1Q9UHL9 959 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 MTUS1Q9ULD2 1270 aa14.79□□□□□ -0.04
SHROOM3-204ENST00000473602 CDKL5O76039 1030 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 DEXIO95424 95 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 ZNF286BP0CG31 522 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 KCNA2P16389 499 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 SSRP1Q08945 709 aaKnown RBP14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 KIAA0753Q2KHM9 967 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 GDF6Q6KF10 455 aaPredicted RBP14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 CYFIP1Q7L576 1253 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 REXO1Q8N1G1 1221 aaKnown RBP14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 CCDC155Q8N6L0 562 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 C7orf31Q8N865 590 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 RAD9AQ99638 391 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 MXRA8Q9BRK3 442 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 C16orf70Q9BSU1 422 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 TET1Q8NFU7 2136 aa14.78□□□□□ -0.04
SHROOM3-204ENST00000473602 TRIP12Q14669 1992 aaPredicted RBP14.77□□□□□ -0.04
SHROOM3-204ENST00000473602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.77□□□□□ -0.05
SHROOM3-204ENST00000473602 H3BRB1 525 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms