RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 C16orf59Q7L2K0 433 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 BRAPQ7Z569 592 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 CARFQ8N187 725 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 FAM26EQ8N5C1 309 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 PCDH19Q8TAB3 1148 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 SH3TC2Q8TF17 1288 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 NOX5Q96PH1 765 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 PARD6AQ9NPB6 346 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 DLL4Q9NR61 685 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 CATSPERZQ9NTU4 200 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 TMEM260Q9NX78 707 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 PCDHA8Q9Y5H6 950 aa6.57□□□□□ -1.36
CNOT4-209ENST00000473470 CCDC66A2RUB6 948 aa6.56□□□□□ -1.36
CNOT4-209ENST00000473470 FAHP16930 419 aa6.56□□□□□ -1.36
CNOT4-209ENST00000473470 SARSP49591 514 aaKnown RBP6.56□□□□□ -1.36
CNOT4-209ENST00000473470 GJA9P57773 515 aa6.56□□□□□ -1.36
CNOT4-209ENST00000473470 SMAD4Q13485 552 aaKnown RBP6.56□□□□□ -1.36
CNOT4-209ENST00000473470 PAN2Q504Q3 1202 aaKnown RBP6.56□□□□□ -1.36
CNOT4-209ENST00000473470 ERICH6BQ5W0A0 696 aa6.56□□□□□ -1.36
CNOT4-209ENST00000473470 TTLL10Q6ZVT0 673 aa6.56□□□□□ -1.36
CNOT4-209ENST00000473470 LILRB2Q8N423 598 aa6.56□□□□□ -1.36
CNOT4-209ENST00000473470 USP40Q9NVE5 1235 aa6.56□□□□□ -1.36
CNOT4-209ENST00000473470 RSF1Q96T23 1441 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-209ENST00000473470 CADPSQ9ULU8 1353 aa6.56□□□□□ -1.36
CNOT4-209ENST00000473470 FANCD2Q9BXW9 1451 aa6.55□□□□□ -1.36
CNOT4-209ENST00000473470 NKRFO15226 690 aaKnown RBP eCLIP6.55□□□□□ -1.36
CNOT4-209ENST00000473470 LRG1P02750 347 aa6.55□□□□□ -1.36
CNOT4-209ENST00000473470 COL6A2P12110 1019 aa6.55□□□□□ -1.36
CNOT4-209ENST00000473470 SLURP1P55000 103 aa6.55□□□□□ -1.36
CNOT4-209ENST00000473470 ADAM9Q13443 819 aa6.55□□□□□ -1.36
CNOT4-209ENST00000473470 NOP9Q86U38 636 aaKnown RBP6.55□□□□□ -1.36
CNOT4-209ENST00000473470 HOMER1Q86YM7 354 aa6.55□□□□□ -1.36
CNOT4-209ENST00000473470 TP53I13Q8NBR0 393 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-209ENST00000473470 RTEL1Q9NZ71 1219 aa6.55□□□□□ -1.36
CNOT4-209ENST00000473470 ATP23Q9Y6H3 246 aa6.55□□□□□ -1.36
CNOT4-209ENST00000473470 TSPOAP1O95153 1857 aa6.55□□□□□ -1.36
CNOT4-209ENST00000473470 KDM6BO15054 1643 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-209ENST00000473470 ZNF561-AS1K7EIQ3 104 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 CHGBP05060 677 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 PYGMP11217 842 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 IGFALSP35858 605 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 ARHGAP36Q6ZRI8 547 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 FAM124AQ86V42 546 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 SLC7A14Q8TBB6 771 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 ZNF526Q8TF50 670 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-209ENST00000473470 TRIM39Q9HCM9 518 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 PCDHA9Q9Y5H5 950 aa6.54□□□□□ -1.36
CNOT4-209ENST00000473470 AQRO60306 1485 aaKnown RBP eCLIP6.53□□□□□ -1.36
CNOT4-209ENST00000473470 EIF4G3O43432 1585 aaKnown RBP6.53□□□□□ -1.36
CNOT4-209ENST00000473470 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 RASGRP1O95267 797 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 SRGAP2CP0DJJ0 459 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 PDE6AP16499 860 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 ZNF28P17035 718 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 PTPN1P18031 435 aaKnown RBP6.53□□□□□ -1.36
CNOT4-209ENST00000473470 SQSTM1Q13501 440 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 TCEA2Q15560 299 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 VMACQ2NL98 169 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 PRR31Q5SQ13 230 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 PRAMEF18Q5VWM3 479 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 CD276Q5ZPR3 534 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 HHIPL2Q6UWX4 724 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 FRMD5Q7Z6J6 570 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 DDX53Q86TM3 631 aaKnown RBP6.53□□□□□ -1.36
CNOT4-209ENST00000473470 DTX3Q8N9I9 347 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 ADAMTS17Q8TE56 1095 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 TEPSINQ96N21 525 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 SPATA25Q9BR10 227 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 CD244Q9BZW8 370 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 PIF1Q9H611 641 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 SPATA6Q9NWH7 488 aaPredicted RBP6.53□□□□□ -1.36
CNOT4-209ENST00000473470 CBLCQ9ULV8 474 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 GAPVD1Q14C86 1478 aa6.53□□□□□ -1.36
CNOT4-209ENST00000473470 TCRBV16S1A1N1A0A5B0 115 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 MAN2B1O00754 1011 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 CLASP2O75122 1294 aaKnown RBP6.52□□□□□ -1.37
CNOT4-209ENST00000473470 HIP1RO75146 1068 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 FLT3P36888 993 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 DNM2P50570 870 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 LACTBP83111 547 aaPredicted RBP6.52□□□□□ -1.37
CNOT4-209ENST00000473470 GRIN1Q05586 938 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 TAF7LQ5H9L4 462 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 BORAQ6PGQ7 559 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 TMC5Q6UXY8 1006 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 CISD2Q8N5K1 135 aaKnown RBP6.52□□□□□ -1.37
CNOT4-209ENST00000473470 CLEC4DQ8WXI8 215 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 APPBP2Q92624 585 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 ZSWIM3Q96MP5 696 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 L2HGDHQ9H9P8 463 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 RIC8BQ9NVN3 520 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 FTSJ1Q9UET6 329 aa6.52□□□□□ -1.37
CNOT4-209ENST00000473470 ZCCHC6Q5VYS8 1495 aaKnown RBP6.52□□□□□ -1.37
CNOT4-209ENST00000473470 PRAMEF25A6NGN4 478 aa6.51□□□□□ -1.37
CNOT4-209ENST00000473470 ZNF839A8K0R7 811 aa6.51□□□□□ -1.37
CNOT4-209ENST00000473470 RFPL3O75679 317 aa6.51□□□□□ -1.37
CNOT4-209ENST00000473470 LTFP02788 710 aa6.51□□□□□ -1.37
CNOT4-209ENST00000473470 ASLP04424 464 aa6.51□□□□□ -1.37
CNOT4-209ENST00000473470 ENO2P09104 434 aaPredicted RBP6.51□□□□□ -1.37
CNOT4-209ENST00000473470 KRT15P19012 456 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms