RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 KCNV1Q6PIU1 500 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 TICAM2Q86XR7 235 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 LINC01599Q8WXQ3 324 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 IL17RAQ96F46 866 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 SAMD11Q96NU1 681 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 INPP4AQ96PE3 977 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-209ENST00000473421 IGFLR1Q9H665 355 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 RIOX1Q9H6W3 641 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 EHMT1Q9H9B1 1298 aa14.63□□□□□ -0.07
TRAF4-209ENST00000473421 ALG13Q9NP73 1137 aaKnown RBP14.63□□□□□ -0.07
TRAF4-209ENST00000473421 ENPP3O14638 875 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 ICAM3P32942 547 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 MGAT3Q09327 533 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 LPIN1Q14693 890 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 SMAD2Q15796 467 aaKnown RBP14.62□□□□□ -0.07
TRAF4-209ENST00000473421 IER5LQ5T953 404 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 METTL7BQ6UX53 244 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 ADGRD2Q7Z7M1 963 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 RTN4RL1Q86UN2 441 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-209ENST00000473421 RNF135Q8IUD6 432 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 FIBCD1Q8N539 461 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 UBAC1Q9BSL1 405 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 DSCC1Q9BVC3 393 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 MAP3K20Q9NYL2 800 aaKnown RBP14.62□□□□□ -0.07
TRAF4-209ENST00000473421 PCDHGC5Q9Y5F6 944 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 FRMPD4Q14CM0 1322 aa14.62□□□□□ -0.07
TRAF4-209ENST00000473421 NOP56O00567 594 aaKnown RBP14.61□□□□□ -0.07
TRAF4-209ENST00000473421 ATP9AO75110 1047 aa14.61□□□□□ -0.07
TRAF4-209ENST00000473421 GRM4Q14833 912 aa14.61□□□□□ -0.07
TRAF4-209ENST00000473421 IMMTQ16891 758 aaKnown RBP14.61□□□□□ -0.07
TRAF4-209ENST00000473421 USP17L6PQ6QN14 398 aa14.61□□□□□ -0.07
TRAF4-209ENST00000473421 SMC5Q8IY18 1101 aa14.61□□□□□ -0.07
TRAF4-209ENST00000473421 ZNF689Q96CS4 500 aaPredicted RBP14.61□□□□□ -0.07
TRAF4-209ENST00000473421 USP26Q9BXU7 913 aa14.61□□□□□ -0.07
TRAF4-209ENST00000473421 KRT23Q9C075 422 aa14.61□□□□□ -0.07
TRAF4-209ENST00000473421 AGO3Q9H9G7 860 aaKnown RBP14.61□□□□□ -0.07
TRAF4-209ENST00000473421 DIAPH3Q9NSV4 1193 aa14.61□□□□□ -0.07
TRAF4-209ENST00000473421 PRKAG3Q9UGI9 489 aa14.61□□□□□ -0.07
TRAF4-209ENST00000473421 TTC3P53804 2025 aa14.61□□□□□ -0.07
TRAF4-209ENST00000473421 USP34Q70CQ2 3546 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 CAND2O75155 1236 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 GATMP50440 423 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 MFAP1P55081 439 aaKnown RBP14.6□□□□□ -0.07
TRAF4-209ENST00000473421 RBM10P98175 930 aaKnown RBP14.6□□□□□ -0.07
TRAF4-209ENST00000473421 ADAM15Q13444 863 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 COL9A3Q14050 684 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-209ENST00000473421 MARCH8Q5T0T0 291 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 CRIPAKQ8N1N5 446 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 PRSS33Q8NF86 280 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 CLP1Q92989 425 aaKnown RBP14.6□□□□□ -0.07
TRAF4-209ENST00000473421 OSBPL3Q9H4L5 887 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 CLEC1BQ9P126 229 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 PLAGL2Q9UPG8 496 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 ADGRA3Q8IWK6 1321 aa14.6□□□□□ -0.07
TRAF4-209ENST00000473421 KIAA1671Q9BY89 1806 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 PNMA6FA0A0J9YX94 578 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 GSTTP1A0A1W2PQM5 241 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 MARK3P27448 753 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 PTH1RQ03431 593 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 TROAPQ12815 778 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 HERC4Q5GLZ8 1057 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-209ENST00000473421 CHD1LQ86WJ1 897 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 DNAJB3Q8WWF6 145 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 MSLNLQ96KJ4 702 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 MRPL42Q9Y6G3 142 aaKnown RBP14.59□□□□□ -0.07
TRAF4-209ENST00000473421 KAT6AQ92794 2004 aa14.59□□□□□ -0.07
TRAF4-209ENST00000473421 MEIS2O14770 477 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 FIBPO43427 364 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 DGKIO75912 1065 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 ITGB1P05556 798 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 RB1P06400 928 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 NUCB1Q02818 461 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 NEDD9Q14511 834 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 FBXO47Q5MNV8 452 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 SAMD3Q8N6K7 520 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 SPPL3Q8TCT6 385 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 APBB2Q92870 758 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 C11orf84Q9BUA3 381 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-209ENST00000473421 CNNM2Q9H8M5 875 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 CDY2AQ9Y6F7 541 aa14.58□□□□□ -0.08
TRAF4-209ENST00000473421 STXBP3O00186 592 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 GLP2RO95838 553 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 MMP1P03956 469 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 CYP21A2P08686 494 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 GNAT1P11488 350 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 KCNA2P16389 499 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 ITGB5P18084 799 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 CD52P31358 61 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 TCF7P36402 384 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-209ENST00000473421 ANTXR2P58335 489 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 SMAD4Q13485 552 aaKnown RBP14.57□□□□□ -0.08
TRAF4-209ENST00000473421 BTG3Q14201 252 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-209ENST00000473421 PCYT2Q99447 389 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 MYL10Q9BUA6 226 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 PKD2L1Q9P0L9 805 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 HCSTQ9UBK5 93 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 CD207Q9UJ71 328 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 NRCAMQ92823 1304 aa14.57□□□□□ -0.08
TRAF4-209ENST00000473421 LOXHD1Q8IVV2 1947 aa14.56□□□□□ -0.08
TRAF4-209ENST00000473421 CFAP54Q96N23 3096 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms