RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 USP20Q9Y2K6 914 aa6.88□□□□□ -1.31
RTF1-203ENST00000473214 VWDEQ8N2E2 1590 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 PLA2R1Q13018 1463 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 A0A1W2PQH9 124 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 UPK3BL1B0FP48 263 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 UPK3BL2E5RIL1 263 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 J3QW42 95 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 PES1O00541 588 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 XYLBO75191 536 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 PRKD3O94806 890 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 IL33O95760 270 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 F13A1P00488 732 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 HSPA6P17066 643 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 TFE3P19532 575 aaPredicted RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 SOX18P35713 384 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 ANP32AP39687 249 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 GP2P55259 537 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 HMGN5P82970 282 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 FZD5Q13467 585 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 TTC31Q49AM3 519 aaPredicted RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 TMEM240Q5SV17 173 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 GPATCH4Q5T3I0 446 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 ANKRD45Q5TZF3 282 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 GDF6Q6KF10 455 aaPredicted RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 TLDC1Q6P9B6 456 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 RASGRP2Q7LDG7 609 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 ZNF438Q7Z4V0 828 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 SAMD14Q8IZD0 417 aaPredicted RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 TEX9Q8N6V9 391 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 C19orf47Q8N9M1 422 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 RBBP8NLQ8NC74 664 aaPredicted RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 DCAF11Q8TEB1 546 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 HSPBAP1Q96EW2 488 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 DDX11Q96FC9 970 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 SLC13A1Q9BZW2 595 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 WDR12Q9GZL7 423 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 DHX36Q9H2U1 1008 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 AGO4Q9HCK5 861 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 NMRK2Q9NPI5 230 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 DCAF16Q9NXF7 216 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 TBK1Q9UHD2 729 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 APOBEC2Q9Y235 224 aaKnown RBP6.87□□□□□ -1.31
RTF1-203ENST00000473214 RNF114Q9Y508 228 aa6.87□□□□□ -1.31
RTF1-203ENST00000473214 AGLP35573 1532 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 KIAA1324LA8MWY0 1029 aaPredicted RBP6.86□□□□□ -1.31
RTF1-203ENST00000473214 EYA2O00167 538 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 PQBP1O60828 265 aaKnown RBP6.86□□□□□ -1.31
RTF1-203ENST00000473214 MMP20O60882 483 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 TMEM127O75204 238 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 BAG2O95816 211 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 PSAPP07602 524 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 CELA3AP09093 270 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 NAT1P18440 290 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 ATP6V1E1P36543 226 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 IRX3P78415 501 aaPredicted RBP6.86□□□□□ -1.31
RTF1-203ENST00000473214 CLCQ05315 142 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 KIAA2012Q0VF49 1180 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 PCBP2Q15366 365 aaKnown RBP eCLIP6.86□□□□□ -1.31
RTF1-203ENST00000473214 PARP10Q53GL7 1025 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 SLC45A4Q5BKX6 768 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 MFSD4BQ5TF39 518 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 IQSEC1Q6DN90 963 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 TPTE2Q6XPS3 522 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 BNC2Q6ZN30 1099 aaPredicted RBP6.86□□□□□ -1.31
RTF1-203ENST00000473214 BRINP3Q76B58 766 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 TTC6Q86TZ1 520 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 TRIM42Q8IWZ5 723 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 GALNT12Q8IXK2 581 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 TEX11Q8IYF3 940 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 CBARPQ8N350 705 aaPredicted RBP6.86□□□□□ -1.31
RTF1-203ENST00000473214 RSRC1Q96IZ7 334 aaKnown RBP6.86□□□□□ -1.31
RTF1-203ENST00000473214 MENTQ9BUN1 341 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 BRMS1Q9HCU9 246 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 ARFGAP3Q9NP61 516 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 CRTAC1Q9NQ79 661 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 PDRG1Q9NUG6 133 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 NFKBIL1Q9UBC1 381 aaPredicted RBP6.86□□□□□ -1.31
RTF1-203ENST00000473214 PPARGC1AQ9UBK2 798 aaKnown RBP6.86□□□□□ -1.31
RTF1-203ENST00000473214 GJD2Q9UKL4 321 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 TRAK1Q9UPV9 953 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 DNM3Q9UQ16 869 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 RAXQ9Y2V3 346 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 KCNMB2Q9Y691 235 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 MYO5CQ9NQX4 1742 aa6.86□□□□□ -1.31
RTF1-203ENST00000473214 CLTCQ00610 1675 aaKnown RBP6.86□□□□□ -1.31
RTF1-203ENST00000473214 ZNF518AQ6AHZ1 1483 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 SHANK2Q9UPX8 1470 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 NPATQ14207 1427 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 KIDINS220Q9ULH0 1771 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 MROH2AA6NES4 1674 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 TRBV23-1A0A0A0MS06 115 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 IPO5O00410 1097 aaKnown RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 MPHOSPH10O00566 681 aaKnown RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 TPP1O14773 563 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 GSC2O15499 205 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 SUSD5O60279 629 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 OPA1O60313 960 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 ZEB2O60315 1214 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 CTNND1O60716 968 aaKnown RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 GHRHP01286 108 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms