RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 EVI5O60447 810 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 CCNT1O60563 726 aaKnown RBP11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 CABYRO75952 493 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 MBD3O95983 291 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 COL6A1P12109 1028 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 KCNA2P16389 499 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 PSMC6P62333 389 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 SETQ01105 290 aaPredicted RBP11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 EARS2Q5JPH6 523 aaKnown RBP11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 UTP14CQ5TAP6 766 aaKnown RBP11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 CCSAPQ6IQ19 270 aaPredicted RBP11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 METTL7BQ6UX53 244 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 NIPA1Q7RTP0 329 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 SLC17A8Q8NDX2 589 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 PPTC7Q8NI37 304 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 CRYGNQ8WXF5 182 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 SENP7Q9BQF6 1050 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 MTG1Q9BT17 334 aaPredicted RBP11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 AGO4Q9HCK5 861 aaKnown RBP11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 JPH1Q9HDC5 661 aaPredicted RBP11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 RCOR1Q9UKL0 485 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 MYH7BA7E2Y1 1941 aa11.93□□□□□ -0.5
SMARCD3-208ENST00000472789 IGLV3-22A0A075B6J6 115 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 A0A0U1RQG5 324 aaPredicted RBP11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 A6NJR5 290 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 KIF28PB7ZC32 967 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 IPO5O00410 1097 aaKnown RBP11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 KPNA6O60684 536 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 PQBP1O60828 265 aaKnown RBP11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 ZNF286BP0CG31 522 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 CIITAP33076 1130 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 NASPP49321 788 aaPredicted RBP11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 UBE2HP62256 183 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 NKX3-2P78367 333 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 PURAQ00577 322 aaKnown RBP11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 CEBPZQ03701 1054 aaKnown RBP11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 ORC2Q13416 577 aaPredicted RBP11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 LRRC26Q2I0M4 334 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 HSDL1Q3SXM5 330 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 FAM47CQ5HY64 1035 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 FAM173BQ6P4H8 233 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 SLC39A5Q6ZMH5 540 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 C7orf61Q8IZ16 206 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 TNFRSF25Q93038 417 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 EMID1Q96A84 441 aaPredicted RBP11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 USP28Q96RU2 1077 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 SLC9A2Q9UBY0 812 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 DDX25Q9UHL0 483 aaKnown RBP11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 NR2E3Q9Y5X4 410 aa11.92□□□□□ -0.5
SMARCD3-208ENST00000472789 SPTLC2O15270 562 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 MSH4O15457 936 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 GAS7O60861 476 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 PPP6R2O75170 966 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 PPFIA4O75335 1185 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 ME1P48163 572 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 RTP1P59025 263 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 ITGB3BPQ13352 177 aaPredicted RBP11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 ITGA7Q13683 1181 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 SLC39A14Q15043 492 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 TRIM60Q495X7 471 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 LINC00301Q8NCQ3 95 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 PPP1R13LQ8WUF5 828 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 LEO1Q8WVC0 666 aaPredicted RBP11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 LRCH3Q96II8 777 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 GPR20Q99678 358 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 LMBRD1Q9NUN5 540 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 SAMM50Q9Y512 469 aa11.91□□□□□ -0.5
SMARCD3-208ENST00000472789 SPTBN5Q9NRC6 3674 aaKnown RBP11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 NFASCO94856 1347 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 ARVCFO00192 962 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 LAD1O00515 517 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 BACH1O14867 736 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 CHMP2AO43633 222 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 SLC37A4O43826 429 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 EDIL3O43854 480 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 TCF7P36402 384 aaPredicted RBP11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 ACTR2P61160 394 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 NBPF20Q3BBV1 942 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 Q4G0T1 1027 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 TTC38Q5R3I4 469 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 LRCH2Q5VUJ6 765 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 MOXD1Q6UVY6 613 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 SEPT1Q8WYJ6 367 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 GLG1Q92896 1179 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 GJA10Q969M2 543 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 SYAP1Q96A49 352 aaPredicted RBP11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 LENG9Q96B70 501 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 TEKT3Q9BXF9 490 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 AZI2Q9H6S1 392 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 PRDM5Q9NQX1 630 aaPredicted RBP11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 TBC1D22BQ9NU19 505 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 TELO2Q9Y4R8 837 aa11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 MORC2Q9Y6X9 1032 aaPredicted RBP11.9□□□□□ -0.5
SMARCD3-208ENST00000472789 ALPK3Q96L96 1907 aa11.9□□□□□ -0.51
SMARCD3-208ENST00000472789 DOCK5Q9H7D0 1870 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 CYP3A7-CYP3A51PA0A087WV96 503 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 A0A1W2PPC1 479 aa11.89□□□□□ -0.51
SMARCD3-208ENST00000472789 DCDC2CA8MYV0 355 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms