RNA–Protein interactions for RNA: ENST00000472194.6

ATAD3B-203, Transcript of ATPase family, AAA domain containing 3B, humanhuman

TSL 1 (best)

Gene ATAD3B, Length 4,314 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3B-203ENST00000472194 VWA3BQ502W6 1294 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 FAM160B1Q5W0V3 765 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 ZFPM1Q8IX07 1006 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 CEP112Q8N8E3 955 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 CDHR1Q96JP9 859 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 AGBL1Q96MI9 1066 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 LLGL1Q15334 1064 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 TAF12Q16514 161 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 ZBTB33Q86T24 672 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 NSUN6Q8TEA1 469 aaKnown RBP13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 CACTINQ8WUQ7 758 aaKnown RBP13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 VCPKMTQ9H867 229 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 JMJD4Q9H9V9 463 aa13.15□□□□□ -0.3
ATAD3B-203ENST00000472194 TCRBV5S4A2TA0A5A2 114 aa13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 IQCA1LA6NCM1 817 aa13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 EVX2Q03828 476 aa13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 CKAP4Q07065 602 aaKnown RBP13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 EXOC3L4Q17RC7 722 aa13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 ZNF280CQ8ND82 737 aa13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 TRIM31Q9BZY9 425 aa13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 DDX4Q9NQI0 724 aaKnown RBP13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 NYAP2Q9P242 653 aa13.15□□□□□ -0.31
ATAD3B-203ENST00000472194 NWD1Q149M9 1564 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 CSPG5O95196 566 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 CCDC25Q86WR0 208 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 FAM186BQ8IYM0 893 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 ADPGKQ9BRR6 497 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 TUBB4AP04350 444 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 PNMA6AP0CW24 399 aaPredicted RBP13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 COG2Q14746 738 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 STXBP2Q15833 593 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 MIS18BP1Q6P0N0 1132 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 EXOC4Q96A65 974 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 ZDHHC15Q96MV8 337 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 AP5M1Q9H0R1 490 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 BUB1O43683 1085 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 LMNB1P20700 586 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 ZRSR2Q15696 482 aaKnown RBP13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 SWSAP1Q6NVH7 229 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 LRRC8AQ8IWT6 810 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 RNF217Q8TC41 542 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 ATG4CQ96DT6 458 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 TMEM60Q9H2L4 133 aa13.14□□□□□ -0.31
ATAD3B-203ENST00000472194 TMEM191BP0C7N4 346 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 NFX1Q12986 1120 aaKnown RBP13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 PHF20Q9BVI0 1012 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 PNMA3Q9UL41 463 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 CAPN7Q9Y6W3 813 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 CCNE1P24864 410 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 SLC8A3P57103 927 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 PSMD2Q13200 908 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 SFR1Q86XK3 245 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 AGBL3Q8NEM8 1001 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 MICAL1Q8TDZ2 1067 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 MED4Q9NPJ6 270 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 SMIM23A6NLE4 172 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 CEP104O60308 925 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 HDXQ7Z353 690 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
ATAD3B-203ENST00000472194 GNA14O95837 355 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 YARSP54577 528 aaKnown RBP13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 TFAMQ00059 246 aaKnown RBP13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 DBN1Q16643 649 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 CEP55Q53EZ4 464 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 HACE1Q8IYU2 909 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 CCDC114Q96M63 670 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 GABBR1Q9UBS5 961 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 IL1R1P14778 569 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 PRCPP42785 496 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 TADA2BQ86TJ2 420 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 NAPGQ99747 312 aaPredicted RBP13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 PSAPP07602 524 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 PSEN1P49768 467 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 MAGEF1Q9HAY2 307 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 H0YCG3 227 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 K7ERI5 159 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 ATP2C1P98194 919 aaPredicted RBP13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 RBL2Q08999 1139 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 MUM1L1Q5H9M0 696 aa13.12□□□□□ -0.31
ATAD3B-203ENST00000472194 TTC19Q6DKK2 380 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms