RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 IQCF3P0C7M6 154 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 SMIM10L2AP0DMW4 78 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 SMIM10L2BP0DMW5 78 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 PTK7Q13308 1070 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 PRR16Q569H4 304 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 ZNF365Q70YC5 407 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 RPUSD2Q8IZ73 545 aaKnown RBP10.41□□□□□ -0.74
SYN3-211ENST00000472027 NSUN7Q8NE18 718 aaKnown RBP10.41□□□□□ -0.74
SYN3-211ENST00000472027 TBCKQ8TEA7 893 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 WASF1Q92558 559 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 DHX38Q92620 1227 aaKnown RBP10.41□□□□□ -0.74
SYN3-211ENST00000472027 RNPC3Q96LT9 517 aaKnown RBP10.41□□□□□ -0.74
SYN3-211ENST00000472027 UIMC1Q96RL1 719 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 IL23AQ9NPF7 189 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 GJB4Q9NTQ9 266 aa10.41□□□□□ -0.74
SYN3-211ENST00000472027 ZNF215Q9UL58 517 aaPredicted RBP10.41□□□□□ -0.74
SYN3-211ENST00000472027 DDX39AO00148 427 aaKnown RBP10.4□□□□□ -0.74
SYN3-211ENST00000472027 IPO5O00410 1097 aaKnown RBP10.4□□□□□ -0.74
SYN3-211ENST00000472027 DHX15O43143 795 aaKnown RBP10.4□□□□□ -0.74
SYN3-211ENST00000472027 ATG7O95352 703 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 FGBP02675 491 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 MARK3P27448 753 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 HOXC8P31273 242 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 ACTR2P61160 394 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 SETQ01105 290 aaPredicted RBP10.4□□□□□ -0.74
SYN3-211ENST00000472027 ST3GAL1Q11201 340 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 PSRC1Q6PGN9 363 aaPredicted RBP10.4□□□□□ -0.74
SYN3-211ENST00000472027 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 CAGE1Q8TC20 777 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 GLG1Q92896 1179 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 ATP6V0A1Q93050 837 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 VWCEQ96DN2 955 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 ZSCAN31Q96LW9 406 aaPredicted RBP10.4□□□□□ -0.74
SYN3-211ENST00000472027 PCYT2Q99447 389 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 ZNF577Q9BSK1 485 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 SMARCAD1Q9H4L7 1026 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 UPF2Q9HAU5 1272 aaKnown RBP10.4□□□□□ -0.74
SYN3-211ENST00000472027 SETD4Q9NVD3 440 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 ERAP1Q9NZ08 941 aa10.4□□□□□ -0.74
SYN3-211ENST00000472027 TREHO43280 583 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 JAK2O60674 1132 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 LGR5O75473 907 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 SLC34A2O95436 690 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 CCNE2O96020 404 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 GNAT1P11488 350 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 CKBP12277 381 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 RFC2P35250 354 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 RBL2Q08999 1139 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 NONOQ15233 471 aaKnown RBP eCLIP10.39□□□□□ -0.75
SYN3-211ENST00000472027 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
SYN3-211ENST00000472027 ABHD15Q6UXT9 468 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 OTOP2Q7RTS6 562 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 PLPPR4Q7Z2D5 763 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 KRT25Q7Z3Z0 450 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 DEFB128Q7Z7B8 93 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 CCDC83Q8IWF9 413 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 OXER1Q8TDS5 423 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 AFAP1L1Q8TED9 768 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 HERVK_113Q902F9 699 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 WNT8BQ93098 351 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 LENG9Q96B70 501 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 AZI2Q9H6S1 392 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 TBC1D22BQ9NU19 505 aa10.39□□□□□ -0.75
SYN3-211ENST00000472027 EMSYQ7Z589 1322 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 NRCAMQ92823 1304 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 CYP3A7-CYP3A51PA0A087WV96 503 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 IGKV6D-21A0A0A0MT36 114 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.38□□□□□ -0.75
SYN3-211ENST00000472027 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.38□□□□□ -0.75
SYN3-211ENST00000472027 MSH4O15457 936 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 PFKMP08237 780 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 SELPP16109 830 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 CYP3A7P24462 503 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 STAT5BP51692 787 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 ADAM17P78536 824 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 SMAD3P84022 425 aaKnown RBP10.38□□□□□ -0.75
SYN3-211ENST00000472027 GPNMBQ14956 572 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 RABEP1Q15276 862 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 INF2Q27J81 1249 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 Q4G0T1 1027 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 ZNF618Q5T7W0 954 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 RASIP1Q5U651 963 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 GPR153Q6NV75 609 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 LRRC8DQ7L1W4 858 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 SERINC5Q86VE9 423 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 LLPHQ9BRT6 129 aaKnown RBP10.38□□□□□ -0.75
SYN3-211ENST00000472027 SH2B1Q9NRF2 756 aaPredicted RBP10.38□□□□□ -0.75
SYN3-211ENST00000472027 GTF3C3Q9Y5Q9 886 aa10.38□□□□□ -0.75
SYN3-211ENST00000472027 CCDC194A0A1B0GVG4 234 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 BACH1O14867 736 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 PARNO95453 639 aaKnown RBP10.37□□□□□ -0.75
SYN3-211ENST00000472027 TDP2O95551 362 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 KRT2P35908 639 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 THPOP40225 353 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 FOSBP53539 338 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 PPFIA1Q13136 1202 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 PLCB4Q15147 1175 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 GRIK4Q16099 956 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 LETM2Q2VYF4 491 aa10.37□□□□□ -0.75
SYN3-211ENST00000472027 EARS2Q5JPH6 523 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms