RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 KCNH7Q9NS40 1196 aa26.73■■□□□ 1.87
RNF220-208ENST00000471494 SETD4Q9NVD3 440 aa26.73■■□□□ 1.87
RNF220-208ENST00000471494 TREHO43280 583 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 NBNO60934 754 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 CXCL10P02778 98 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 ZNF76P36508 570 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 KCNJ6P48051 423 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 CCT2P78371 535 aaKnown RBP26.72■■□□□ 1.87
RNF220-208ENST00000471494 GPNMBQ14956 572 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 PKN1Q16512 942 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 CEP55Q53EZ4 464 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 JAKMIP3Q5VZ66 844 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 CNKSR3Q6P9H4 555 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 CYP2W1Q8TAV3 490 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 SDF4Q9BRK5 362 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 RNF26Q9BY78 433 aaPredicted RBP26.72■■□□□ 1.87
RNF220-208ENST00000471494 UPF3BQ9BZI7 483 aaKnown RBP26.72■■□□□ 1.87
RNF220-208ENST00000471494 TM6SF1Q9BZW5 370 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 ZMYND12Q9H0C1 365 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 C6orf50Q9HD87 102 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 CHD9Q3L8U1 2897 aa26.72■■□□□ 1.87
RNF220-208ENST00000471494 EMSYQ7Z589 1322 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 GSTTP1A0A1W2PQM5 241 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 IFNAR1P17181 557 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 TOB2Q14106 344 aaPredicted RBP26.71■■□□□ 1.87
RNF220-208ENST00000471494 NTRK3Q16288 839 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 PPP2R2DQ66LE6 453 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 MCTP2Q6DN12 878 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 TRAF7Q6Q0C0 670 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 PHOSPHO2Q8TCD6 241 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 GLG1Q92896 1179 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 SLC26A6Q9BXS9 759 aa26.71■■□□□ 1.87
RNF220-208ENST00000471494 NCOA5Q9HCD5 579 aaKnown RBP26.71■■□□□ 1.87
RNF220-208ENST00000471494 MICAL3Q7RTP6 2002 aa26.7■■□□□ 1.87
RNF220-208ENST00000471494 PPFIA3O75145 1194 aa26.7■■□□□ 1.86
RNF220-208ENST00000471494 MYOGP15173 224 aa26.7■■□□□ 1.86
RNF220-208ENST00000471494 ARHGAP4P98171 946 aa26.7■■□□□ 1.86
RNF220-208ENST00000471494 REXO1Q8N1G1 1221 aaKnown RBP26.7■■□□□ 1.86
RNF220-208ENST00000471494 LMBR1Q8WVP7 490 aa26.7■■□□□ 1.86
RNF220-208ENST00000471494 GAS2L1Q99501 681 aaPredicted RBP26.7■■□□□ 1.86
RNF220-208ENST00000471494 PRDM12Q9H4Q4 367 aa26.7■■□□□ 1.86
RNF220-208ENST00000471494 ERAP1Q9NZ08 941 aa26.7■■□□□ 1.86
RNF220-208ENST00000471494 SLC9A2Q9UBY0 812 aa26.7■■□□□ 1.86
RNF220-208ENST00000471494 NFASCO94856 1347 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 NRCAMQ92823 1304 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 RSPH10B2B2RC85 870 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 CAND2O75155 1236 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 RSPH10BP0C881 870 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 ARP10275 920 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 MARK3P27448 753 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 GNA11P29992 359 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 MBTPS1Q14703 1052 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 CCDC148Q8NFR7 591 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 SMARCAD1Q9H4L7 1026 aa26.69■■□□□ 1.86
RNF220-208ENST00000471494 MEIS1O00470 390 aa26.68■■□□□ 1.86
RNF220-208ENST00000471494 WDR5P61964 334 aaKnown RBP26.68■■□□□ 1.86
RNF220-208ENST00000471494 NIPA1Q7RTP0 329 aa26.68■■□□□ 1.86
RNF220-208ENST00000471494 HERC6Q8IVU3 1022 aa26.68■■□□□ 1.86
RNF220-208ENST00000471494 TRIM22Q8IYM9 498 aa26.68■■□□□ 1.86
RNF220-208ENST00000471494 BICD2Q8TD16 824 aa26.68■■□□□ 1.86
RNF220-208ENST00000471494 AGO4Q9HCK5 861 aaKnown RBP26.68■■□□□ 1.86
RNF220-208ENST00000471494 ABHD14A-ACY1A0A1B0GW23 586 aa26.67■■□□□ 1.86
RNF220-208ENST00000471494 EFCAB14O75071 495 aa26.67■■□□□ 1.86
RNF220-208ENST00000471494 LGR5O75473 907 aa26.67■■□□□ 1.86
RNF220-208ENST00000471494 PPFIA1Q13136 1202 aa26.67■■□□□ 1.86
RNF220-208ENST00000471494 ZNF274Q96GC6 653 aaPredicted RBP26.67■■□□□ 1.86
RNF220-208ENST00000471494 AZI2Q9H6S1 392 aa26.67■■□□□ 1.86
RNF220-208ENST00000471494 PDRG1Q9NUG6 133 aa26.67■■□□□ 1.86
RNF220-208ENST00000471494 KIF28PB7ZC32 967 aa26.66■■□□□ 1.86
RNF220-208ENST00000471494 CPLX1O14810 134 aa26.66■■□□□ 1.86
RNF220-208ENST00000471494 CA3P07451 260 aa26.66■■□□□ 1.86
RNF220-208ENST00000471494 CTSHP09668 335 aa26.66■■□□□ 1.86
RNF220-208ENST00000471494 ACTR2P61160 394 aa26.66■■□□□ 1.86
RNF220-208ENST00000471494 ADAM17P78536 824 aa26.66■■□□□ 1.86
RNF220-208ENST00000471494 ITGB3BPQ13352 177 aaPredicted RBP26.66■■□□□ 1.86
RNF220-208ENST00000471494 IKBKEQ14164 716 aa26.66■■□□□ 1.86
RNF220-208ENST00000471494 CPLX2Q6PUV4 134 aaKnown RBP26.65■■□□□ 1.86
RNF220-208ENST00000471494 PLA2G4DQ86XP0 818 aa26.65■■□□□ 1.86
RNF220-208ENST00000471494 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.65■■□□□ 1.86
RNF220-208ENST00000471494 LARP6Q9BRS8 491 aaKnown RBP26.65■■□□□ 1.86
RNF220-208ENST00000471494 VPS54Q9P1Q0 977 aa26.65■■□□□ 1.86
RNF220-208ENST00000471494 EYSQ5T1H1 3165 aa26.65■■□□□ 1.86
RNF220-208ENST00000471494 MYH9P35579 1960 aaKnown RBP26.64■■□□□ 1.86
RNF220-208ENST00000471494 FAM86B1E9PN63 330 aa26.64■■□□□ 1.86
RNF220-208ENST00000471494 ADAMTS3O15072 1205 aa26.64■■□□□ 1.86
RNF220-208ENST00000471494 CYP3A4P08684 503 aa26.64■■□□□ 1.86
RNF220-208ENST00000471494 FAM86B2P0C5J1 330 aa26.64■■□□□ 1.86
RNF220-208ENST00000471494 SSRP1Q08945 709 aaKnown RBP26.64■■□□□ 1.86
RNF220-208ENST00000471494 GRIK4Q16099 956 aa26.64■■□□□ 1.86
RNF220-208ENST00000471494 TCTN1Q2MV58 587 aa26.64■■□□□ 1.86
RNF220-208ENST00000471494 CRYGNQ8WXF5 182 aa26.64■■□□□ 1.86
RNF220-208ENST00000471494 SH3GLB2Q9NR46 395 aa26.64■■□□□ 1.86
RNF220-208ENST00000471494 TUBE1Q9UJT0 475 aa26.64■■□□□ 1.86
RNF220-208ENST00000471494 SIP14410 1827 aa26.64■■□□□ 1.85
RNF220-208ENST00000471494 CHD7Q9P2D1 2997 aa26.63■■□□□ 1.85
RNF220-208ENST00000471494 TLL1O43897 1013 aa26.63■■□□□ 1.85
RNF220-208ENST00000471494 DEFB103AP81534 67 aa26.63■■□□□ 1.85
RNF220-208ENST00000471494 STK3Q13188 491 aa26.63■■□□□ 1.85
RNF220-208ENST00000471494 TAF2Q6P1X5 1199 aa26.63■■□□□ 1.85
RNF220-208ENST00000471494 RASGRP4Q8TDF6 673 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms