RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 USP40Q9NVE5 1235 aa7.18□□□□□ -1.26
SEMA3A-206ENST00000471474 MAGEC2Q9UBF1 373 aaPredicted RBP7.18□□□□□ -1.26
SEMA3A-206ENST00000471474 CBLCQ9ULV8 474 aa7.18□□□□□ -1.26
SEMA3A-206ENST00000471474 SRPK3Q9UPE1 567 aa7.18□□□□□ -1.26
SEMA3A-206ENST00000471474 SLC12A8A0AV02 714 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 KCNK3O14649 394 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 KCNQ2O43526 872 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 CYP1A1P04798 512 aaPredicted RBP7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 FAHP16930 419 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 PTPN1P18031 435 aaKnown RBP7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 JAM2P57087 298 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 PIK3R6Q5UE93 754 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 FAM124AQ86V42 546 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 FEZ1Q99689 392 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 GORASP1Q9BQQ3 440 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 ZKSCAN5Q9Y2L8 839 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 CD2APQ9Y5K6 639 aa7.17□□□□□ -1.26
SEMA3A-206ENST00000471474 TLDC2A0PJX2 215 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 WNT9AO14904 365 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 JMJD7P0C870 316 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 ITGA1P56199 1179 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 JAG1P78504 1218 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 ARHGAP44Q17R89 818 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 CR1LQ2VPA4 569 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 ZCCHC8Q6NZY4 707 aaKnown RBP7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 PKN3Q6P5Z2 889 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 SCLYQ96I15 445 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 NOX5Q96PH1 765 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 PCIF1Q9H4Z3 704 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 TRIM39Q9HCM9 518 aa7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 TNPO3Q9Y5L0 923 aaKnown RBP7.16□□□□□ -1.26
SEMA3A-206ENST00000471474 M0R2C6 588 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 RFPL3O75679 317 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 LRG1P02750 347 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 PLA2G1BP04054 148 aaKnown RBP7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 GLRBP48167 497 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 LACTBP83111 547 aaPredicted RBP7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 TMEM132BQ14DG7 1078 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 ZNF174Q15697 407 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 TMEM177Q53S58 311 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 TRMT10BQ6PF06 316 aaKnown RBP7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 SAPCD2Q86UD0 394 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 JAZF1Q86VZ6 243 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 NIM1KQ8IY84 436 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 ZNF526Q8TF50 670 aaPredicted RBP7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 CLUHP3Q96NS8 147 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 EPB41L4AQ9HCS5 686 aaPredicted RBP7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 DLL4Q9NR61 685 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 IFT57Q9NWB7 429 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 ARHGAP20Q9P2F6 1191 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 FTSJ1Q9UET6 329 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 PLAAQ9Y263 795 aa7.15□□□□□ -1.26
SEMA3A-206ENST00000471474 GAS7O60861 476 aa7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 EPHA5P54756 1037 aa7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 GJA9P57773 515 aa7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 CAP1Q01518 475 aa7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 HABP4Q5JVS0 413 aaKnown RBP7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 DPP8Q6V1X1 898 aaPredicted RBP7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 DHX37Q8IY37 1157 aaKnown RBP7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 ADGRG2Q8IZP9 1017 aa7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 AHI1Q8N157 1196 aa7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 CARFQ8N187 725 aa7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 HIPK4Q8NE63 616 aa7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 INTS7Q9NVH2 962 aaKnown RBP7.14□□□□□ -1.27
SEMA3A-206ENST00000471474 H7C1D1 291 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 DDX3XO00571 662 aaKnown RBP eCLIP7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 MAN2B1O00754 1011 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 CLASP2O75122 1294 aaKnown RBP7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 CKMP06732 381 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 THBS2P35442 1172 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 IRF9Q00978 393 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 PFKPQ01813 784 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 KIAA2012Q0VF49 1180 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 ERICH6BQ5W0A0 696 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 CPZQ66K79 652 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 LINC00482Q8N8I6 264 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 NINJ1Q92982 152 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 BOCQ9BWV1 1114 aa7.13□□□□□ -1.27
SEMA3A-206ENST00000471474 TCRBV5S4A2TA0A5A2 114 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 ZNF561-AS1K7EIQ3 104 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 FFAR3O14843 346 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 AMY2AP04746 511 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 AMY2BP19961 511 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 RPL13P26373 211 aaKnown RBP7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 HTRA3P83110 453 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 SKIDA1Q1XH10 827 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 CD276Q5ZPR3 534 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 CDCA2Q69YH5 1023 aaPredicted RBP7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 MCTP2Q6DN12 878 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 LIPIQ6XZB0 460 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 OVCH1Q7RTY7 1134 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 CHST14Q8NCH0 376 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 SH3RF2Q8TEC5 729 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 ERCC4Q92889 916 aaPredicted RBP7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 SYT3Q9BQG1 590 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 SPATA25Q9BR10 227 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 TMEM168Q9H0V1 697 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 KCNH7Q9NS40 1196 aa7.12□□□□□ -1.27
SEMA3A-206ENST00000471474 A0A1B0GTL3 188 aa7.11□□□□□ -1.27
SEMA3A-206ENST00000471474 SH3D21A4FU49 640 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms