RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 EEPD1Q7L9B9 569 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 FGD2Q7Z6J4 655 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 CPNE8Q86YQ8 564 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 RCBTB1Q8NDN9 531 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 DNERQ8NFT8 737 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 ZNF669Q96BR6 464 aaPredicted RBP3.93□□□□□ -1.78
UBXN4-206ENST00000470687 MTA3Q9BTC8 594 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 IER2Q9BTL4 223 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 TRIM39Q9HCM9 518 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 CYP26B1Q9NR63 512 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 UACAQ9BZF9 1416 aa3.93□□□□□ -1.78
UBXN4-206ENST00000470687 GOLGA3Q08378 1498 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 TEX14Q8IWB6 1497 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 RAPGEF2Q9Y4G8 1499 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 ABCC2Q92887 1545 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 TLDC2A0PJX2 215 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 GPR42O15529 346 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 B4GALT3O60512 393 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 ZBTB7AO95365 584 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 CD3EP07766 207 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 FGFR1P11362 822 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 PABPC1P11940 636 aaKnown RBP3.92□□□□□ -1.78
UBXN4-206ENST00000470687 PLS3P13797 630 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 R3HDM1Q15032 1099 aaKnown RBP3.92□□□□□ -1.78
UBXN4-206ENST00000470687 SURF1Q15526 300 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 EGFLAMQ63HQ2 1017 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 RCSD1Q6JBY9 416 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 ADAT2Q7Z6V5 191 aaKnown RBP3.92□□□□□ -1.78
UBXN4-206ENST00000470687 PALM2Q8IXS6 379 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 LZTR1Q8N653 840 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 KYQ8NBH2 561 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 TXNDC5Q8NBS9 432 aaKnown RBP3.92□□□□□ -1.78
UBXN4-206ENST00000470687 SGSM3Q96HU1 749 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 SYT3Q9BQG1 590 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 TRIM55Q9BYV6 548 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 CLEC1BQ9P126 229 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 RWDD3Q9Y3V2 267 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 TRAF6Q9Y4K3 522 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 GLI2P10070 1586 aa3.92□□□□□ -1.78
UBXN4-206ENST00000470687 RUSC2Q8N2Y8 1516 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.91□□□□□ -1.78
UBXN4-206ENST00000470687 C7orf72A4D263 438 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 C2orf71A6NGG8 1288 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 PRODHO43272 600 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 SSRP1Q08945 709 aaKnown RBP3.91□□□□□ -1.78
UBXN4-206ENST00000470687 C21orf62-AS1Q17RA5 79 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 MTERF2Q49AM1 385 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 PRR31Q5SQ13 230 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 ERCC6L2Q5T890 1561 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 ZNF585AQ6P3V2 769 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 KIAA0907Q7Z7F0 614 aaPredicted RBP3.91□□□□□ -1.78
UBXN4-206ENST00000470687 GSTCDQ8NEC7 633 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 PLEKHO2Q8TD55 490 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 EPN3Q9H201 632 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 SLC52A2Q9HAB3 445 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 PCDH18Q9HCL0 1135 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 KIF13AQ9H1H9 1805 aa3.91□□□□□ -1.78
UBXN4-206ENST00000470687 KDM5BQ9UGL1 1544 aa3.9□□□□□ -1.78
UBXN4-206ENST00000470687 IQGAP2Q13576 1575 aa3.9□□□□□ -1.78
UBXN4-206ENST00000470687 TCRBV5S4A2TA0A5A2 114 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 C9orf118A6NHY6 69 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 ENPP3O14638 875 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 KCNQ2O43526 872 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 PPM1BO75688 479 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 CKMP06732 381 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 SELENOPP49908 381 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 TRIM61Q5EBN2 209 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 SPDYAQ5MJ70 313 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 NOL9Q5SY16 702 aaKnown RBP3.9□□□□□ -1.79
UBXN4-206ENST00000470687 WWC2Q6AWC2 1192 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 PLEKHH3Q7Z736 793 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 CIR1Q86X95 450 aaPredicted RBP3.9□□□□□ -1.79
UBXN4-206ENST00000470687 Q8N1Y9 231 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 TTLL6Q8N841 843 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 THAP3Q8WTV1 239 aaPredicted RBP3.9□□□□□ -1.79
UBXN4-206ENST00000470687 LCORQ96JN0 433 aaPredicted RBP3.9□□□□□ -1.79
UBXN4-206ENST00000470687 WWC2-AS2Q96NR7 200 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 AARSD1Q9BTE6 412 aaKnown RBP3.9□□□□□ -1.79
UBXN4-206ENST00000470687 WASF3Q9UPY6 502 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 MRPS23Q9Y3D9 190 aaKnown RBP3.9□□□□□ -1.79
UBXN4-206ENST00000470687 BACE2Q9Y5Z0 518 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 UGGT2Q9NYU1 1516 aa3.9□□□□□ -1.79
UBXN4-206ENST00000470687 ADCY10Q96PN6 1610 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 A0A087X0B3 334 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 NPEPPSL1A6NEC2 478 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 DDX3XO00571 662 aaKnown RBP eCLIP3.89□□□□□ -1.79
UBXN4-206ENST00000470687 DNAJC8O75937 253 aaPredicted RBP3.89□□□□□ -1.79
UBXN4-206ENST00000470687 HOXC12P31275 282 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 ECI1P42126 302 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 ITGA1P56199 1179 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 AMPD2Q01433 879 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 POU4F1Q01851 419 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 MAP4K2Q12851 820 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 DALRD3Q5D0E6 543 aaKnown RBP3.89□□□□□ -1.79
UBXN4-206ENST00000470687 ETV3LQ6ZN32 361 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 FAM26EQ8N5C1 309 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 IGDCC4Q8TDY8 1250 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 SH3RF2Q8TEC5 729 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 MMP19Q99542 508 aa3.89□□□□□ -1.79
UBXN4-206ENST00000470687 DHRS4Q9BTZ2 278 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms