RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 TTLL6Q8N841 843 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 KYQ8NBH2 561 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 GSTCDQ8NEC7 633 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 TTLL11Q8NHH1 800 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 PCDH19Q8TAB3 1148 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 FBXW5Q969U6 566 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 MAGEB10Q96LZ2 347 aaPredicted RBP6.06□□□□□ -1.44
COL9A1-206ENST00000470652 NOX5Q96PH1 765 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 GORASP1Q9BQQ3 440 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 C11orf84Q9BUA3 381 aaPredicted RBP6.06□□□□□ -1.44
COL9A1-206ENST00000470652 PDGFDQ9GZP0 370 aaPredicted RBP6.06□□□□□ -1.44
COL9A1-206ENST00000470652 SLC52A2Q9HAB3 445 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 HSPBP1Q9NZL4 362 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 PCDHA9Q9Y5H5 950 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 SOGA1O94964 1423 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.05□□□□□ -1.44
COL9A1-206ENST00000470652 SH3D21A4FU49 640 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 KCNQ2O43526 872 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 SMARCA5O60264 1052 aaPredicted RBP6.05□□□□□ -1.44
COL9A1-206ENST00000470652 ST5P78524 1137 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 FAM47CQ5HY64 1035 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 TEPPQ6URK8 271 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 TTLL7Q6ZT98 887 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 C16orf59Q7L2K0 433 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 ZC3H7AQ8IWR0 971 aaKnown RBP6.05□□□□□ -1.44
COL9A1-206ENST00000470652 FAM9AQ8IZU1 332 aaPredicted RBP6.05□□□□□ -1.44
COL9A1-206ENST00000470652 SLC7A14Q8TBB6 771 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 FEZF2Q8TBJ5 459 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 SH3TC2Q8TF17 1288 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 CLEC4DQ8WXI8 215 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 NCOA5Q9HCD5 579 aaKnown RBP6.05□□□□□ -1.44
COL9A1-206ENST00000470652 CATSPERZQ9NTU4 200 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 SFMBT1Q9UHJ3 866 aa6.05□□□□□ -1.44
COL9A1-206ENST00000470652 PLD2O14939 933 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 LRG1P02750 347 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 SRGAP2CP0DJJ0 459 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 EPHA5P54756 1037 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 ITGA1P56199 1179 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 KRTAP10-2P60368 255 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 DLX2Q07687 328 aaPredicted RBP6.04□□□□□ -1.44
COL9A1-206ENST00000470652 TUSC3Q13454 348 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 ERICH6BQ5W0A0 696 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 ARHGAP36Q6ZRI8 547 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 KCTD1Q719H9 257 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.04□□□□□ -1.44
COL9A1-206ENST00000470652 SP8Q8IXZ3 490 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 NLGN4XQ8N0W4 816 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 TP53I13Q8NBR0 393 aaPredicted RBP6.04□□□□□ -1.44
COL9A1-206ENST00000470652 ZNF526Q8TF50 670 aaPredicted RBP6.04□□□□□ -1.44
COL9A1-206ENST00000470652 PIF1Q9H611 641 aa6.04□□□□□ -1.44
COL9A1-206ENST00000470652 LUC7LQ9NQ29 371 aaKnown RBP6.04□□□□□ -1.44
COL9A1-206ENST00000470652 AQRO60306 1485 aaKnown RBP eCLIP6.03□□□□□ -1.44
COL9A1-206ENST00000470652 EIF4G3O43432 1585 aaKnown RBP6.03□□□□□ -1.44
COL9A1-206ENST00000470652 PYGMP11217 842 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 NFKB2Q00653 900 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 SMAD4Q13485 552 aaKnown RBP6.03□□□□□ -1.44
COL9A1-206ENST00000470652 SQSTM1Q13501 440 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 GPR19Q15760 415 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 CRY1Q16526 586 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 FNDC3BQ53EP0 1204 aaKnown RBP6.03□□□□□ -1.44
COL9A1-206ENST00000470652 LIPIQ6XZB0 460 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 EP400NLQ6ZTU2 488 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 TMEM209Q96SK2 561 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 TMEM260Q9NX78 707 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 NTMQ9P121 344 aa6.03□□□□□ -1.44
COL9A1-206ENST00000470652 TDRD9Q8NDG6 1382 aaKnown RBP6.03□□□□□ -1.44
COL9A1-206ENST00000470652 PBRM1Q86U86 1689 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 CCDC66A2RUB6 948 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 CYP7B1O75881 506 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 RASGRP1O95267 797 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 PDE6AP16499 860 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 FAHP16930 419 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 KCNC1P48547 511 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 SARSP49591 514 aaKnown RBP6.02□□□□□ -1.45
COL9A1-206ENST00000470652 SLURP1P55000 103 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 GRIN1Q05586 938 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 PAN2Q504Q3 1202 aaKnown RBP6.02□□□□□ -1.45
COL9A1-206ENST00000470652 BRAPQ7Z569 592 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 STK32CQ86UX6 486 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 OSTM1Q86WC4 334 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 RBM12BQ8IXT5 1001 aaKnown RBP6.02□□□□□ -1.45
COL9A1-206ENST00000470652 CARFQ8N187 725 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 SYT8Q8NBV8 401 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 SYT3Q9BQG1 590 aa6.02□□□□□ -1.45
COL9A1-206ENST00000470652 SPATA6Q9NWH7 488 aaPredicted RBP6.02□□□□□ -1.45
COL9A1-206ENST00000470652 ABCA5Q8WWZ7 1642 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 TCRBV5S4A2TA0A5A2 114 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 NPTXRO95502 500 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 LTFP02788 710 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 RPL13P26373 211 aaKnown RBP6.01□□□□□ -1.45
COL9A1-206ENST00000470652 THBS2P35442 1172 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 DNM2P50570 870 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 LACTBP83111 547 aaPredicted RBP6.01□□□□□ -1.45
COL9A1-206ENST00000470652 ADGRG2Q8IZP9 1017 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 SYNPOQ8N3V7 929 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 SH3RF2Q8TEC5 729 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 SCLYQ96I15 445 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 CLIC6Q96NY7 704 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 WRNIP1Q96S55 665 aa6.01□□□□□ -1.45
COL9A1-206ENST00000470652 CELF4Q9BZC1 486 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms