RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 FAM43AQ8N2R8 423 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 SH3TC2Q8TF17 1288 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 OPTNQ96CV9 577 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 AIFM3Q96NN9 605 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 PIGSQ96S52 555 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 SLF1Q9BQI6 1058 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 ANP32EQ9BTT0 268 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 ARHGAP39Q9C0H5 1083 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 UBA5Q9GZZ9 404 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 ZMYND12Q9H0C1 365 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 VAT1LQ9HCJ6 419 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 VPS54Q9P1Q0 977 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 PCDHA4Q9UN74 947 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 CEP131Q9UPN4 1083 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 AFG3L2Q9Y4W6 797 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 CTDP1Q9Y5B0 961 aaPredicted RBP7.57□□□□□ -1.2
VAMP3-202ENST00000470357 SNCAIPQ9Y6H5 919 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 ELP1O95163 1332 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 CCDC194A0A1B0GVG4 234 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 TRIM75PA6NK02 468 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 STXBP3O00186 592 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 SOX1O00570 391 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 CDK2AP1O14519 115 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 YEATS4O95619 227 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 VSIG8P0DPA2 414 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 VCAM1P19320 739 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 CTGFP29279 349 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 SLC16A2P36021 539 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 ADCY7P51828 1080 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 DNM1Q05193 864 aaKnown RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 ORC2Q13416 577 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 MTFR1Q15390 333 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 ZYXQ15942 572 aaKnown RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 QRICH1Q2TAL8 776 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 WWC2Q6AWC2 1192 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 TTBK2Q6IQ55 1244 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 SV2AQ7L0J3 742 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 FASTKD5Q7L8L6 764 aaKnown RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 KRT25Q7Z3Z0 450 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 SPICE1Q8N0Z3 855 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 REXO1Q8N1G1 1221 aaKnown RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 SAMD3Q8N6K7 520 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 TMEM87AQ8NBN3 555 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 KCNG4Q8TDN1 519 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 RHBDD1Q8TEB9 315 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 PIBF1Q8WXW3 757 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 NANOS1Q8WY41 292 aaKnown RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 CUL5Q93034 780 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 SPATA32Q96LK8 384 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 NAP1L4Q99733 375 aaKnown RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 TANGO6Q9C0B7 1094 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 MAF1Q9H063 256 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 RANBP17Q9H2T7 1088 aaKnown RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 VRTNQ9H8Y1 702 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 HOXC10Q9NYD6 342 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 PRR12Q9ULL5 1215 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 KCNJ14Q9UNX9 436 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 COL11A1P12107 1806 aaPredicted RBP7.56□□□□□ -1.2
VAMP3-202ENST00000470357 RLFQ13129 1914 aa7.56□□□□□ -1.2
VAMP3-202ENST00000470357 ABCB11O95342 1321 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 hCG_1642624A0A1W2PR95 340 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 GOLGA6L4A6NEF3 574 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 SMCO2A6NFE2 343 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 SFI1A8K8P3 1242 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 BTBD18B2RXH4 712 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP17L15C9J2P7 530 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP17L13C9JLJ4 530 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP17L11C9JVI0 530 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP17L18D6R9N7 530 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP17L22D6RA61 530 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP17L17D6RBQ6 530 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP17L19D6RCP7 530 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP17L20D6RJB6 530 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 DTNBO60941 627 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 ZBED4O75132 1171 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 FLOT1O75955 427 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 MBD3O95983 291 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 FOSP01100 380 aaPredicted RBP7.55□□□□□ -1.2
VAMP3-202ENST00000470357 OAZ1P54368 228 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 HMGCS2P54868 508 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 LACTBP83111 547 aaPredicted RBP7.55□□□□□ -1.2
VAMP3-202ENST00000470357 USP17L24Q0WX57 530 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 COG2Q14746 738 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 TAF1CQ15572 869 aaPredicted RBP7.55□□□□□ -1.2
VAMP3-202ENST00000470357 DBN1Q16643 649 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 SLC35G1Q2M3R5 365 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 RASGRP2Q7LDG7 609 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 MB21D1Q8N884 522 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 NUP88Q99567 741 aaPredicted RBP7.55□□□□□ -1.2
VAMP3-202ENST00000470357 RPAP3Q9H6T3 665 aaPredicted RBP7.55□□□□□ -1.2
VAMP3-202ENST00000470357 PSTPIP2Q9H939 334 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 EHMT1Q9H9B1 1298 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 ELP3Q9H9T3 547 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 GPAMQ9HCL2 828 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 RIC8AQ9NPQ8 531 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 RTEL1Q9NZ71 1219 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 PPP1R9AQ9ULJ8 1098 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 KCNH4Q9UQ05 1017 aa7.55□□□□□ -1.2
VAMP3-202ENST00000470357 MRPL11Q9Y3B7 192 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms