RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 SEPT1Q8WYJ6 367 aa20.86■□□□□ 0.93
PHGDH-204ENST00000469443 ATP6V0A1Q93050 837 aa20.86■□□□□ 0.93
PHGDH-204ENST00000469443 WNT8BQ93098 351 aa20.86■□□□□ 0.93
PHGDH-204ENST00000469443 TIFAQ96CG3 184 aa20.86■□□□□ 0.93
PHGDH-204ENST00000469443 FTOQ9C0B1 505 aaKnown RBP eCLIP20.86■□□□□ 0.93
PHGDH-204ENST00000469443 RNPEPQ9H4A4 650 aa20.86■□□□□ 0.93
PHGDH-204ENST00000469443 NFASCO94856 1347 aa20.85■□□□□ 0.93
PHGDH-204ENST00000469443 PPFIA3O75145 1194 aa20.85■□□□□ 0.93
PHGDH-204ENST00000469443 ARP10275 920 aa20.85■□□□□ 0.93
PHGDH-204ENST00000469443 PBX2P40425 430 aa20.85■□□□□ 0.93
PHGDH-204ENST00000469443 ANAPC15P60006 121 aa20.85■□□□□ 0.93
PHGDH-204ENST00000469443 GPNMBQ14956 572 aa20.85■□□□□ 0.93
PHGDH-204ENST00000469443 RAB30Q15771 203 aa20.85■□□□□ 0.93
PHGDH-204ENST00000469443 TRIM22Q8IYM9 498 aa20.85■□□□□ 0.93
PHGDH-204ENST00000469443 CDX2Q99626 313 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-204ENST00000469443 LARP6Q9BRS8 491 aaKnown RBP20.85■□□□□ 0.93
PHGDH-204ENST00000469443 JPH1Q9HDC5 661 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-204ENST00000469443 MICAL3Q7RTP6 2002 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 MEIS1O00470 390 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 CPLX1O14810 134 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 ADAMTS3O15072 1205 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 GNAT1P11488 350 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 ZNF76P36508 570 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 ZNF618Q5T7W0 954 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 TRAF7Q6Q0C0 670 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 NIPA1Q7RTP0 329 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 BICD2Q8TD16 824 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 CRYGNQ8WXF5 182 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 SLC9A2Q9UBY0 812 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 MSRAQ9UJ68 235 aa20.84■□□□□ 0.93
PHGDH-204ENST00000469443 TREHO43280 583 aa20.83■□□□□ 0.93
PHGDH-204ENST00000469443 EIF5BO60841 1220 aaKnown RBP20.83■□□□□ 0.93
PHGDH-204ENST00000469443 CXCL10P02778 98 aa20.83■□□□□ 0.93
PHGDH-204ENST00000469443 CYP3A4P08684 503 aa20.83■□□□□ 0.93
PHGDH-204ENST00000469443 SSRP1Q08945 709 aaKnown RBP20.83■□□□□ 0.93
PHGDH-204ENST00000469443 CPLX2Q6PUV4 134 aaKnown RBP20.83■□□□□ 0.93
PHGDH-204ENST00000469443 SDF4Q9BRK5 362 aa20.83■□□□□ 0.93
PHGDH-204ENST00000469443 ZNF576Q9H609 170 aa20.83■□□□□ 0.93
PHGDH-204ENST00000469443 AGO4Q9HCK5 861 aaKnown RBP20.83■□□□□ 0.93
PHGDH-204ENST00000469443 SH3GLB2Q9NR46 395 aa20.83■□□□□ 0.93
PHGDH-204ENST00000469443 SETD4Q9NVD3 440 aa20.83■□□□□ 0.93
PHGDH-204ENST00000469443 VPS54Q9P1Q0 977 aa20.83■□□□□ 0.93
PHGDH-204ENST00000469443 EMSYQ7Z589 1322 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 NBNO60934 754 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 BAIAP3O94812 1187 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 ATP2A2P16615 1042 aaKnown RBP20.82■□□□□ 0.92
PHGDH-204ENST00000469443 ADAM17P78536 824 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 STK3Q13188 491 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 GLG1Q92896 1179 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 SLC9A7Q96T83 725 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 SMARCAD1Q9H4L7 1026 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 ERAP1Q9NZ08 941 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 SIP14410 1827 aa20.82■□□□□ 0.92
PHGDH-204ENST00000469443 NRCAMQ92823 1304 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 LOXHD1Q8IVV2 1947 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 FAM86B1E9PN63 330 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 DEXIO95424 95 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 FAM86B2P0C5J1 330 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 THPOP40225 353 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 ITGB3BPQ13352 177 aaPredicted RBP20.81■□□□□ 0.92
PHGDH-204ENST00000469443 CNKSR3Q6P9H4 555 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 PLA2G4DQ86XP0 818 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 RASGRP4Q8TDF6 673 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 LMBR1Q8WVP7 490 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 MYLIPQ8WY64 445 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 CHD9Q3L8U1 2897 aa20.81■□□□□ 0.92
PHGDH-204ENST00000469443 IGLV3-22A0A075B6J6 115 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 CAND2O75155 1236 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 LGR5O75473 907 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 RABGGTBP53611 331 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 NLRP5P59047 1200 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 MBTPS1Q14703 1052 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 GRIN2CQ14957 1233 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 PHOSPHO2Q8TCD6 241 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 IL17RAQ96F46 866 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 NKX2-4Q9H2Z4 354 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 YBX2Q9Y2T7 364 aaKnown RBP20.8■□□□□ 0.92
PHGDH-204ENST00000469443 PCDHA11Q9Y5I1 949 aa20.8■□□□□ 0.92
PHGDH-204ENST00000469443 RSPH10B2B2RC85 870 aa20.79■□□□□ 0.92
PHGDH-204ENST00000469443 RSPH10BP0C881 870 aa20.79■□□□□ 0.92
PHGDH-204ENST00000469443 MARK3P27448 753 aa20.79■□□□□ 0.92
PHGDH-204ENST00000469443 KCNJ6P48051 423 aa20.79■□□□□ 0.92
PHGDH-204ENST00000469443 ACTR2P61160 394 aa20.79■□□□□ 0.92
PHGDH-204ENST00000469443 PPFIA1Q13136 1202 aa20.79■□□□□ 0.92
PHGDH-204ENST00000469443 PCYT2Q99447 389 aa20.79■□□□□ 0.92
PHGDH-204ENST00000469443 AZI2Q9H6S1 392 aa20.79■□□□□ 0.92
PHGDH-204ENST00000469443 SLC28A3Q9HAS3 691 aa20.79■□□□□ 0.92
PHGDH-204ENST00000469443 EVPLQ92817 2033 aa20.78■□□□□ 0.92
PHGDH-204ENST00000469443 CIITAP33076 1130 aa20.78■□□□□ 0.92
PHGDH-204ENST00000469443 SETQ01105 290 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-204ENST00000469443 ANKRD1Q15327 319 aa20.78■□□□□ 0.92
PHGDH-204ENST00000469443 GRIK4Q16099 956 aa20.78■□□□□ 0.92
PHGDH-204ENST00000469443 FAM177A1Q8N128 213 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-204ENST00000469443 SLKQ9H2G2 1235 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-204ENST00000469443 TPCN1Q9ULQ1 816 aa20.78■□□□□ 0.92
PHGDH-204ENST00000469443 ABHD14A-ACY1A0A1B0GW23 586 aa20.77■□□□□ 0.92
PHGDH-204ENST00000469443 DDX39AO00148 427 aaKnown RBP20.77■□□□□ 0.92
PHGDH-204ENST00000469443 PFKFB2O60825 505 aa20.77■□□□□ 0.92
PHGDH-204ENST00000469443 CDKL5O76039 1030 aa20.77■□□□□ 0.92
PHGDH-204ENST00000469443 ATG7O95352 703 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms