RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SYT2Q8N9I0 419 aaPredicted RBP21.15■□□□□ 0.98
SMC4-209ENST00000468653 NEK9Q8TD19 979 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 SMCR8Q8TEV9 937 aaPredicted RBP21.15■□□□□ 0.98
SMC4-209ENST00000468653 MRFAP1L1Q96HT8 127 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 SLC45A1Q9Y2W3 748 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 BTBD19C9JJ37 291 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 PSMA7O14818 248 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 EYA4O95677 639 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 SERPINC1P01008 464 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 ZBTB48P10074 688 aaPredicted RBP21.15■□□□□ 0.98
SMC4-209ENST00000468653 CYP11B2P19099 503 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 CDK11BP21127 795 aaKnown RBP21.15■□□□□ 0.98
SMC4-209ENST00000468653 CDC25BP30305 580 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 GNPTABQ3T906 1256 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 BRI3BPQ8WY22 251 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 DNAJC19Q96DA6 116 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 IFNKQ9P0W0 207 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 ADD3Q9UEY8 706 aaKnown RBP21.15■□□□□ 0.98
SMC4-209ENST00000468653 SAMM50Q9Y512 469 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 GOLGA6L6A8MZA4 724 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 ATP9AO75110 1047 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 FCER1AP12319 257 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 PPP1R2P41236 205 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 ALDH5A1P51649 535 aaPredicted RBP21.14■□□□□ 0.97
SMC4-209ENST00000468653 ERVK-9P63128 1117 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 ERVK-24P63145 666 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 STK4Q13043 487 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 STXBP2Q15833 593 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 HS1BP3Q53T59 392 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 ANKRD23Q86SG2 305 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 CCDC65Q8IXS2 484 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 CDHR1Q96JP9 859 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 PANK4Q9NVE7 773 aa21.14■□□□□ 0.97
SMC4-209ENST00000468653 HUNKP57058 714 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 PSMD2Q13200 908 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 HSP90AA4PQ58FG1 418 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 WDR78Q5VTH9 848 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 NACC1Q96RE7 527 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 BHMT2Q9H2M3 363 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 MROH8Q9H579 483 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 SLC39A2Q9NP94 309 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 SAMSN1Q9NSI8 373 aaKnown RBP21.13■□□□□ 0.97
SMC4-209ENST00000468653 NPHP3-ACAD11A0A0J9YXS1 232 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 COBLO75128 1261 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 KRT76Q01546 638 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 KCTD2Q14681 263 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 BANK1Q8NDB2 785 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 PIGOQ8TEQ8 1089 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 HPS3Q969F9 1004 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 DHTKD1Q96HY7 919 aaPredicted RBP21.13■□□□□ 0.97
SMC4-209ENST00000468653 MMP19Q99542 508 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 LXNQ9BS40 222 aa21.13■□□□□ 0.97
SMC4-209ENST00000468653 XPO4Q9C0E2 1151 aaKnown RBP21.13■□□□□ 0.97
SMC4-209ENST00000468653 CBFA2T2O43439 604 aa21.12■□□□□ 0.97
SMC4-209ENST00000468653 EIF3JO75822 258 aaKnown RBP21.12■□□□□ 0.97
SMC4-209ENST00000468653 RGS20O76081 388 aa21.12■□□□□ 0.97
SMC4-209ENST00000468653 P4HBP07237 508 aaKnown RBP21.12■□□□□ 0.97
SMC4-209ENST00000468653 ZNF18P17022 549 aa21.12■□□□□ 0.97
SMC4-209ENST00000468653 JAK3P52333 1124 aa21.12■□□□□ 0.97
SMC4-209ENST00000468653 COASYQ13057 564 aa21.12■□□□□ 0.97
SMC4-209ENST00000468653 ARSHQ5FYA8 562 aa21.12■□□□□ 0.97
SMC4-209ENST00000468653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.12■□□□□ 0.971e-6■■■■■ 406.9
SMC4-209ENST00000468653 GPRC5AQ8NFJ5 357 aa21.12■□□□□ 0.97
SMC4-209ENST00000468653 SOWAHBA6NEL2 793 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 B4DLN1 442 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 UBASH3AP57075 661 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 RAD51AP2Q09MP3 1159 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 COBLL1Q53SF7 1204 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 FAM133AQ8N9E0 248 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 KIAA0895Q8NCT3 520 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 SHCBP1Q8NEM2 672 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 R3HDMLQ9H3Y0 253 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 ASTN1O14525 1302 aa21.11■□□□□ 0.97
SMC4-209ENST00000468653 WDR64B1ANS9 1081 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 SFNP31947 248 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 CCNA1P78396 465 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 CACNB1Q02641 598 aaPredicted RBP21.1■□□□□ 0.97
SMC4-209ENST00000468653 MPHOSPH6Q99547 160 aaKnown RBP21.1■□□□□ 0.97
SMC4-209ENST00000468653 ZHX3Q9H4I2 956 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 ZSWIM4Q9H7M6 989 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 WRAP73Q9P2S5 460 aaPredicted RBP21.1■□□□□ 0.97
SMC4-209ENST00000468653 LCTP09848 1927 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 SPATA31C2B4DYI2 1134 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 KCNA2P16389 499 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 GCLCP48506 637 aaPredicted RBP21.1■□□□□ 0.97
SMC4-209ENST00000468653 EHHADHQ08426 723 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 GIT2Q14161 759 aa21.1■□□□□ 0.97
SMC4-209ENST00000468653 HERC4Q5GLZ8 1057 aaPredicted RBP21.1■□□□□ 0.97
SMC4-209ENST00000468653 ZNF746Q6NUN9 644 aaPredicted RBP21.1■□□□□ 0.97
SMC4-209ENST00000468653 BICDL2A1A5D9 508 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 ZBTB39O15060 712 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 PGK2P07205 417 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 QARSP47897 775 aaKnown RBP21.09■□□□□ 0.97
SMC4-209ENST00000468653 FSTL1Q12841 308 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 FAM26FQ5R3K3 315 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 FAM43AQ8N2R8 423 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 ANKRD13CQ8N6S4 541 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 RDM1Q8NG50 284 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 P2RX5Q93086 422 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 RUSC1Q9BVN2 902 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms