RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 ZNF577Q9BSK1 485 aa19.69■□□□□ 0.74
CLDN11-202ENST00000468358 PHF20Q9BVI0 1012 aa19.69■□□□□ 0.74
CLDN11-202ENST00000468358 WNT8AQ9H1J5 351 aa19.69■□□□□ 0.74
CLDN11-202ENST00000468358 TRIP12Q14669 1992 aaPredicted RBP19.69■□□□□ 0.74
CLDN11-202ENST00000468358 KAT6AQ92794 2004 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 IGLV3-22A0A075B6J6 115 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 CCDC194A0A1B0GVG4 234 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 IPO5O00410 1097 aaKnown RBP19.68■□□□□ 0.74
CLDN11-202ENST00000468358 SMIM10L2AP0DMW4 78 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 SMIM10L2BP0DMW5 78 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 MARK3P27448 753 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 ZNF200P98182 395 aaPredicted RBP19.68■□□□□ 0.74
CLDN11-202ENST00000468358 TRIM29Q14134 588 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 NONOQ15233 471 aaKnown RBP eCLIP19.68■□□□□ 0.74
CLDN11-202ENST00000468358 KRT25Q7Z3Z0 450 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 ZSCAN31Q96LW9 406 aaPredicted RBP19.68■□□□□ 0.74
CLDN11-202ENST00000468358 AZI2Q9H6S1 392 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 BRMS1Q9HCU9 246 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 IL23AQ9NPF7 189 aa19.68■□□□□ 0.74
CLDN11-202ENST00000468358 SOX1O00570 391 aaPredicted RBP19.67■□□□□ 0.74
CLDN11-202ENST00000468358 ST18O60284 1047 aa19.67■□□□□ 0.74
CLDN11-202ENST00000468358 FDPSP14324 419 aaKnown RBP19.67■□□□□ 0.74
CLDN11-202ENST00000468358 USP11P51784 963 aa19.67■□□□□ 0.74
CLDN11-202ENST00000468358 ACTR2P61160 394 aa19.67■□□□□ 0.74
CLDN11-202ENST00000468358 LRIT3Q3SXY7 679 aa19.67■□□□□ 0.74
CLDN11-202ENST00000468358 PSRC1Q6PGN9 363 aaPredicted RBP19.67■□□□□ 0.74
CLDN11-202ENST00000468358 ATP6V0A1Q93050 837 aa19.67■□□□□ 0.74
CLDN11-202ENST00000468358 LRCH3Q96II8 777 aa19.67■□□□□ 0.74
CLDN11-202ENST00000468358 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.67■□□□□ 0.74
CLDN11-202ENST00000468358 SMARCAD1Q9H4L7 1026 aa19.67■□□□□ 0.74
CLDN11-202ENST00000468358 ERAP1Q9NZ08 941 aa19.67■□□□□ 0.74
CLDN11-202ENST00000468358 TANC1Q9C0D5 1861 aa19.67■□□□□ 0.74
CLDN11-202ENST00000468358 SCN5AQ14524 2016 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 PITPNM1O00562 1244 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 GNAT1P11488 350 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 CIITAP33076 1130 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 NPY5RQ15761 445 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 INF2Q27J81 1249 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 ZNF365Q70YC5 407 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 DEFB128Q7Z7B8 93 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 RPUSD2Q8IZ73 545 aaKnown RBP19.66■□□□□ 0.74
CLDN11-202ENST00000468358 CAGE1Q8TC20 777 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 RNPEPQ9H4A4 650 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 SH2B1Q9NRF2 756 aaPredicted RBP19.66■□□□□ 0.74
CLDN11-202ENST00000468358 TBC1D22BQ9NU19 505 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 SETD4Q9NVD3 440 aa19.66■□□□□ 0.74
CLDN11-202ENST00000468358 M0R2N6 131 aa19.65■□□□□ 0.74
CLDN11-202ENST00000468358 BACH1O14867 736 aa19.65■□□□□ 0.74
CLDN11-202ENST00000468358 KRT2P35908 639 aa19.65■□□□□ 0.74
CLDN11-202ENST00000468358 ST3GAL1Q11201 340 aa19.65■□□□□ 0.74
CLDN11-202ENST00000468358 PTK7Q13308 1070 aa19.65■□□□□ 0.74
CLDN11-202ENST00000468358 TMEM240Q5SV17 173 aa19.65■□□□□ 0.74
CLDN11-202ENST00000468358 EMSYQ7Z589 1322 aa19.65■□□□□ 0.74
CLDN11-202ENST00000468358 TDP2O95551 362 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 FGBP02675 491 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 IQCF3P0C7M6 154 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 PPFIA1Q13136 1202 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 HIC1Q14526 733 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 LETM2Q2VYF4 491 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 PIK3AP1Q6ZUJ8 805 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 C16orf59Q7L2K0 433 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 OXER1Q8TDS5 423 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 AFAP1L1Q8TED9 768 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 DHX38Q92620 1227 aaKnown RBP19.64■□□□□ 0.73
CLDN11-202ENST00000468358 CTAGE1Q96RT6 745 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 FTOQ9C0B1 505 aaKnown RBP eCLIP19.64■□□□□ 0.73
CLDN11-202ENST00000468358 MTIF3Q9H2K0 278 aaKnown RBP19.64■□□□□ 0.73
CLDN11-202ENST00000468358 TRPC6Q9Y210 931 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 SAMM50Q9Y512 469 aa19.64■□□□□ 0.73
CLDN11-202ENST00000468358 TREHO43280 583 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 CCNE2O96020 404 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 SELPP16109 830 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 STAT5BP51692 787 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 FAM160B1Q5W0V3 765 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 MIS18BP1Q6P0N0 1132 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 LRRC8DQ7L1W4 858 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 OTOP2Q7RTS6 562 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 FAM184AQ8NB25 1140 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 LMBR1Q8WVP7 490 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 LENG9Q96B70 501 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 TBC1D32Q96NH3 1257 aa19.63■□□□□ 0.73
CLDN11-202ENST00000468358 LLPHQ9BRT6 129 aaKnown RBP19.63■□□□□ 0.73
CLDN11-202ENST00000468358 NRCAMQ92823 1304 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 ZBBXA8MT70 800 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 MSH4O15457 936 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 DHX15O43143 795 aaKnown RBP19.62■□□□□ 0.73
CLDN11-202ENST00000468358 GAS7O60861 476 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 LGR5O75473 907 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 CKBP12277 381 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 RFC2P35250 354 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 THPOP40225 353 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 IGBP1P78318 339 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 KRT76Q01546 638 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 GUCY1B3Q02153 619 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 NR5A1Q13285 461 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 LRCH2Q5VUJ6 765 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 KRT40Q6A162 431 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 NEK8Q86SG6 692 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 SERINC5Q86VE9 423 aa19.62■□□□□ 0.73
CLDN11-202ENST00000468358 PCYT2Q99447 389 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms