RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 KCNA2P16389 499 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 ERVK-9P63128 1117 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 ERVK-24P63145 666 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 MTMR1Q13613 665 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 CCL15Q16663 113 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 XRRA1Q6P2D8 792 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 MLKLQ8NB16 471 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 NSUN6Q8TEA1 469 aaKnown RBP9.24□□□□□ -0.93
BRCA1-208ENST00000468300 PAGR1Q9BTK6 254 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 PCDHA2Q9Y5H9 948 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 MCM3APO60318 1980 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 SMC2O95347 1197 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 MYCLP12524 364 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-208ENST00000468300 OSBPP22059 807 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 ALDH5A1P51649 535 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-208ENST00000468300 FOXD4Q12950 439 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-208ENST00000468300 ZNF658Q5TYW1 1059 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-208ENST00000468300 SARM1Q6SZW1 724 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 DNERQ8NFT8 737 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 HPS3Q969F9 1004 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 PFASO15067 1338 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 ZNF236Q9UL36 1845 aa9.24□□□□□ -0.93
BRCA1-208ENST00000468300 NPHP3-ACAD11A0A0J9YXS1 232 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 ADCY5O95622 1261 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 ZNF18P17022 549 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 ZNF513Q8N8E2 541 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-208ENST00000468300 KIAA0895Q8NCT3 520 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 GIMAP8Q8ND71 665 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-208ENST00000468300 DYDC2Q96IM9 177 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 KDM3AQ9Y4C1 1321 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 CENPFP49454 3210 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 FRMD3A2A2Y4 597 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 SPATA31C2B4DYI2 1134 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 GAS7O60861 476 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 FCER1AP12319 257 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 CYP11B2P19099 503 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 CCND2P30279 289 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 PRCPP42785 496 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 PMS1P54277 932 aaKnown RBP9.23□□□□□ -0.93
BRCA1-208ENST00000468300 STK4Q13043 487 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 CTTNQ14247 550 aaKnown RBP9.23□□□□□ -0.93
BRCA1-208ENST00000468300 NCAPG2Q86XI2 1143 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 DDX12PQ92771 950 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 FGFBP2Q9BYJ0 223 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 NT5C3AQ9H0P0 336 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 MORF4L1Q9UBU8 362 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 IGF2BP3O00425 579 aaKnown RBP eCLIP9.23□□□□□ -0.93
BRCA1-208ENST00000468300 CHMP2AO43633 222 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 COBLO75128 1261 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 PEX14O75381 377 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 SLC25A27O95847 323 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 PGK2P07205 417 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 PLA2G4BP0C869 781 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 ATP1A3P13637 1013 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 CYP4A11Q02928 519 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 CCDC173Q0VFZ6 552 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 UGCGQ16739 394 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 SV2BQ7L1I2 683 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 APTXQ7Z2E3 356 aaKnown RBP9.23□□□□□ -0.93
BRCA1-208ENST00000468300 TRMT44Q8IYL2 757 aaKnown RBP9.23□□□□□ -0.93
BRCA1-208ENST00000468300 ADSSL1Q8N142 457 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 SYT2Q8N9I0 419 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-208ENST00000468300 GLIS3Q8NEA6 775 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 GPRASP2Q96D09 838 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 IWS1Q96ST2 819 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 EFCC1Q9HA90 598 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 TUFT1Q9NNX1 390 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 PKD2L1Q9P0L9 805 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 FBXO40Q9UH90 709 aa9.23□□□□□ -0.93
BRCA1-208ENST00000468300 STBD1O95210 358 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 HUNKP57058 714 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 PABPC4Q13310 644 aaKnown RBP eCLIP9.22□□□□□ -0.93
BRCA1-208ENST00000468300 EPHA7Q15375 998 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 COBLL1Q53SF7 1204 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 ANKRD35Q8N283 1001 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 ENOX1Q8TC92 643 aaKnown RBP9.22□□□□□ -0.93
BRCA1-208ENST00000468300 MORC4Q8TE76 937 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 SENP7Q9BQF6 1050 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 TEKT3Q9BXF9 490 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 NAT10Q9H0A0 1025 aaKnown RBP9.22□□□□□ -0.93
BRCA1-208ENST00000468300 DDX39AO00148 427 aaKnown RBP9.22□□□□□ -0.93
BRCA1-208ENST00000468300 ERCC5P28715 1186 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-208ENST00000468300 ICAM3P32942 547 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 DHX8Q14562 1220 aaKnown RBP9.22□□□□□ -0.93
BRCA1-208ENST00000468300 HAUS3Q68CZ6 603 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 ANKRD13CQ8N6S4 541 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 SHCBP1Q8NEM2 672 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 RASSF8Q8NHQ8 419 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 FANCLQ9NW38 375 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 MYL5Q02045 173 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 GIT2Q14161 759 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 NBPF20Q3BBV1 942 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 CT47A1Q5JQC4 288 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-208ENST00000468300 UNC13DQ70J99 1090 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 DYMQ7RTS9 669 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 RUSC1Q9BVN2 902 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 TLL2Q9Y6L7 1015 aa9.22□□□□□ -0.93
BRCA1-208ENST00000468300 ZSWIM8A7E2V4 1837 aa9.21□□□□□ -0.93
BRCA1-208ENST00000468300 PVALEFA0A1B0GWK0 134 aa9.21□□□□□ -0.93
BRCA1-208ENST00000468300 STAM2O75886 525 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms