RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SERINC5Q86VE9 423 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 TRIM50Q86XT4 487 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 SEPT1Q8WYJ6 367 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 WNT8BQ93098 351 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 LARP6Q9BRS8 491 aaKnown RBP19.52■□□□□ 0.72
SSBP1-207ENST00000468267 PBX4Q9BYU1 374 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 FTOQ9C0B1 505 aaKnown RBP eCLIP19.52■□□□□ 0.72
SSBP1-207ENST00000468267 RNPEPQ9H4A4 650 aa19.52■□□□□ 0.72
SSBP1-207ENST00000468267 ZNF215Q9UL58 517 aaPredicted RBP19.52■□□□□ 0.72
SSBP1-207ENST00000468267 MEIS1O00470 390 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 ADAMTS3O15072 1205 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 PARNO95453 639 aaKnown RBP19.51■□□□□ 0.71
SSBP1-207ENST00000468267 ACTN1P12814 892 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 GNA11P29992 359 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 PBX2P40425 430 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 ANAPC15P60006 121 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 ARHGAP4P98171 946 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 GPNMBQ14956 572 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 ATP6V0A1Q93050 837 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 TIFAQ96CG3 184 aa19.51■□□□□ 0.71
SSBP1-207ENST00000468267 CDX2Q99626 313 aaPredicted RBP19.51■□□□□ 0.71
SSBP1-207ENST00000468267 UNC80Q8N2C7 3258 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 TRANK1O15050 2925 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 ZBBXA8MT70 800 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 CYP3A4P08684 503 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 ARP10275 920 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 ZNF76P36508 570 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 SSRP1Q08945 709 aaKnown RBP19.5■□□□□ 0.71
SSBP1-207ENST00000468267 NIPA1Q7RTP0 329 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 REXO1Q8N1G1 1221 aaKnown RBP19.5■□□□□ 0.71
SSBP1-207ENST00000468267 CRYGNQ8WXF5 182 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 AGO4Q9HCK5 861 aaKnown RBP19.5■□□□□ 0.71
SSBP1-207ENST00000468267 JPH1Q9HDC5 661 aaPredicted RBP19.5■□□□□ 0.71
SSBP1-207ENST00000468267 SH3GLB2Q9NR46 395 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 SETD4Q9NVD3 440 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 SLC9A2Q9UBY0 812 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 NFASCO94856 1347 aa19.5■□□□□ 0.71
SSBP1-207ENST00000468267 TREHO43280 583 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 EIF5BO60841 1220 aaKnown RBP19.49■□□□□ 0.71
SSBP1-207ENST00000468267 CXCL10P02778 98 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 GNAT1P11488 350 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 RAB30Q15771 203 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 ZNF618Q5T7W0 954 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 TRAF7Q6Q0C0 670 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 TRIM22Q8IYM9 498 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 CCDC148Q8NFR7 591 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 BICD2Q8TD16 824 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 SDF4Q9BRK5 362 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 ZNF576Q9H609 170 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 MSRAQ9UJ68 235 aa19.49■□□□□ 0.71
SSBP1-207ENST00000468267 CPLX1O14810 134 aa19.48■□□□□ 0.71
SSBP1-207ENST00000468267 NBNO60934 754 aa19.48■□□□□ 0.71
SSBP1-207ENST00000468267 ATP2A2P16615 1042 aaKnown RBP19.48■□□□□ 0.71
SSBP1-207ENST00000468267 ADAM17P78536 824 aa19.48■□□□□ 0.71
SSBP1-207ENST00000468267 STK3Q13188 491 aa19.48■□□□□ 0.71
SSBP1-207ENST00000468267 ITGB3BPQ13352 177 aaPredicted RBP19.48■□□□□ 0.71
SSBP1-207ENST00000468267 IL17RAQ96F46 866 aa19.48■□□□□ 0.71
SSBP1-207ENST00000468267 SMARCAD1Q9H4L7 1026 aa19.48■□□□□ 0.71
SSBP1-207ENST00000468267 ERAP1Q9NZ08 941 aa19.48■□□□□ 0.71
SSBP1-207ENST00000468267 VPS54Q9P1Q0 977 aa19.48■□□□□ 0.71
SSBP1-207ENST00000468267 IGLV3-22A0A075B6J6 115 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 FAM86B1E9PN63 330 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 LGR5O75473 907 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 BAIAP3O94812 1187 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 FAM86B2P0C5J1 330 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 THPOP40225 353 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 MBTPS1Q14703 1052 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 CPLX2Q6PUV4 134 aaKnown RBP19.47■□□□□ 0.71
SSBP1-207ENST00000468267 LMBR1Q8WVP7 490 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 GLG1Q92896 1179 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 NRCAMQ92823 1304 aa19.47■□□□□ 0.71
SSBP1-207ENST00000468267 RSPH10B2B2RC85 870 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 DEXIO95424 95 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 RSPH10BP0C881 870 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 RABGGTBP53611 331 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 ACTR2P61160 394 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 GRIN2CQ14957 1233 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 CNKSR3Q6P9H4 555 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 PLA2G4DQ86XP0 818 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 PHOSPHO2Q8TCD6 241 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 RASGRP4Q8TDF6 673 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 MYLIPQ8WY64 445 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 PCYT2Q99447 389 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 YBX2Q9Y2T7 364 aaKnown RBP19.46■□□□□ 0.71
SSBP1-207ENST00000468267 PCDHA11Q9Y5I1 949 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 EMSYQ7Z589 1322 aa19.46■□□□□ 0.71
SSBP1-207ENST00000468267 CAND2O75155 1236 aa19.45■□□□□ 0.7
SSBP1-207ENST00000468267 ATG7O95352 703 aa19.45■□□□□ 0.7
SSBP1-207ENST00000468267 MARK3P27448 753 aa19.45■□□□□ 0.7
SSBP1-207ENST00000468267 NLRP5P59047 1200 aa19.45■□□□□ 0.7
SSBP1-207ENST00000468267 SLC9A7Q96T83 725 aa19.45■□□□□ 0.7
SSBP1-207ENST00000468267 SLKQ9H2G2 1235 aaPredicted RBP19.45■□□□□ 0.7
SSBP1-207ENST00000468267 NKX2-4Q9H2Z4 354 aa19.45■□□□□ 0.7
SSBP1-207ENST00000468267 TPCN1Q9ULQ1 816 aa19.45■□□□□ 0.7
SSBP1-207ENST00000468267 PTPRSQ13332 1948 aa19.45■□□□□ 0.7
SSBP1-207ENST00000468267 IPO5O00410 1097 aaKnown RBP19.44■□□□□ 0.7
SSBP1-207ENST00000468267 DHX15O43143 795 aaKnown RBP19.44■□□□□ 0.7
SSBP1-207ENST00000468267 PFKFB2O60825 505 aa19.44■□□□□ 0.7
SSBP1-207ENST00000468267 SEC24BO95487 1268 aa19.44■□□□□ 0.7
SSBP1-207ENST00000468267 CIITAP33076 1130 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms