RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ACTR2P61160 394 aa22.69■■□□□ 1.22
NPHP4-206ENST00000468253 ZNF746Q6NUN9 644 aaPredicted RBP22.69■■□□□ 1.22
NPHP4-206ENST00000468253 PLPPR4Q7Z2D5 763 aa22.69■■□□□ 1.22
NPHP4-206ENST00000468253 SLC5A5Q92911 643 aa22.69■■□□□ 1.22
NPHP4-206ENST00000468253 PRO3102Q9H379 93 aa22.69■■□□□ 1.22
NPHP4-206ENST00000468253 PRDM5Q9NQX1 630 aaPredicted RBP22.69■■□□□ 1.22
NPHP4-206ENST00000468253 GTF2IRD1Q9UHL9 959 aa22.69■■□□□ 1.22
NPHP4-206ENST00000468253 TELO2Q9Y4R8 837 aa22.69■■□□□ 1.22
NPHP4-206ENST00000468253 IGKV6D-21A0A0A0MT36 114 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 RAG1P15918 1043 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 KRT76Q01546 638 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 SP4Q02446 784 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 LETM2Q2VYF4 491 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 FAM47CQ5HY64 1035 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 EARS2Q5JPH6 523 aaKnown RBP22.68■■□□□ 1.22
NPHP4-206ENST00000468253 ABHD15Q6UXT9 468 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 TNPO1Q92973 898 aaKnown RBP22.68■■□□□ 1.22
NPHP4-206ENST00000468253 SNX21Q969T3 373 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 FAM20AQ96MK3 541 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 ERAP1Q9NZ08 941 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 HDAC6Q9UBN7 1215 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 DDX25Q9UHL0 483 aaKnown RBP22.68■■□□□ 1.22
NPHP4-206ENST00000468253 SCN10AQ9Y5Y9 1956 aa22.68■■□□□ 1.22
NPHP4-206ENST00000468253 TBX3O15119 743 aa22.67■■□□□ 1.22
NPHP4-206ENST00000468253 TDP2O95551 362 aa22.67■■□□□ 1.22
NPHP4-206ENST00000468253 MAGEA10P43363 369 aaPredicted RBP22.67■■□□□ 1.22
NPHP4-206ENST00000468253 SLC26A2P50443 739 aa22.67■■□□□ 1.22
NPHP4-206ENST00000468253 UTP14CQ5TAP6 766 aaKnown RBP22.67■■□□□ 1.22
NPHP4-206ENST00000468253 SMAP1Q8IYB5 467 aaPredicted RBP22.67■■□□□ 1.22
NPHP4-206ENST00000468253 AZI2Q9H6S1 392 aa22.67■■□□□ 1.22
NPHP4-206ENST00000468253 TRMT13Q9NUP7 481 aaKnown RBP22.67■■□□□ 1.22
NPHP4-206ENST00000468253 SMC3Q9UQE7 1217 aa22.67■■□□□ 1.22
NPHP4-206ENST00000468253 EMSYQ7Z589 1322 aa22.66■■□□□ 1.22
NPHP4-206ENST00000468253 CCNE2O96020 404 aa22.66■■□□□ 1.22
NPHP4-206ENST00000468253 GNAT1P11488 350 aa22.66■■□□□ 1.22
NPHP4-206ENST00000468253 HOXC8P31273 242 aa22.66■■□□□ 1.22
NPHP4-206ENST00000468253 GUCY1B3Q02153 619 aa22.66■■□□□ 1.22
NPHP4-206ENST00000468253 ETNPPLQ8TBG4 499 aa22.66■■□□□ 1.22
NPHP4-206ENST00000468253 GLG1Q92896 1179 aa22.66■■□□□ 1.22
NPHP4-206ENST00000468253 PCYT2Q99447 389 aa22.66■■□□□ 1.22
NPHP4-206ENST00000468253 TCEAL9Q9UHQ7 104 aa22.66■■□□□ 1.22
NPHP4-206ENST00000468253 ALPK3Q96L96 1907 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 CCNT1O60563 726 aaKnown RBP22.65■■□□□ 1.22
NPHP4-206ENST00000468253 PSMD10O75832 226 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 ITGB8P26012 769 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 U2AF2P26368 475 aaKnown RBP eCLIP22.65■■□□□ 1.22
NPHP4-206ENST00000468253 GJB2P29033 226 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 STAT5BP51692 787 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 CHMP4BP1P59074 171 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 PTGISQ16647 500 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 GDF6Q6KF10 455 aaPredicted RBP22.65■■□□□ 1.22
NPHP4-206ENST00000468253 MFSD5Q6N075 450 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 MIS18BP1Q6P0N0 1132 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 RDM1Q8NG50 284 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 AFAP1L1Q8TED9 768 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 INTS4Q96HW7 963 aaKnown RBP22.65■■□□□ 1.22
NPHP4-206ENST00000468253 NOC4LQ9BVI4 516 aaKnown RBP22.65■■□□□ 1.22
NPHP4-206ENST00000468253 RNPEPQ9H4A4 650 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 KCNMB3Q9NPA1 279 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 PCDHA10Q9Y5I2 948 aa22.65■■□□□ 1.22
NPHP4-206ENST00000468253 NRCAMQ92823 1304 aa22.64■■□□□ 1.22
NPHP4-206ENST00000468253 A0A1W2PPC1 479 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 GAS7O60861 476 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 SMIM10L2AP0DMW4 78 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 SMIM10L2BP0DMW5 78 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 B3GNT9Q6UX72 402 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 BADQ92934 168 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 CTAGE1Q96RT6 745 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 TEKT3Q9BXF9 490 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 HIPK3Q9H422 1215 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 NOD1Q9Y239 953 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 MYH7BA7E2Y1 1941 aa22.64■■□□□ 1.21
NPHP4-206ENST00000468253 C17orf102A2RUQ5 167 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 WDR64B1ANS9 1081 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 PSAPP07602 524 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 SFNP31947 248 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 FOSBP53539 338 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 MDM2Q00987 491 aaPredicted RBP22.63■■□□□ 1.21
NPHP4-206ENST00000468253 PTK7Q13308 1070 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 LRCH2Q5VUJ6 765 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 FAM160B1Q5W0V3 765 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 CHRDL2Q6WN34 429 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 TRIM50Q86XT4 487 aa22.63■■□□□ 1.21
NPHP4-206ENST00000468253 COLQQ9Y215 455 aaPredicted RBP22.63■■□□□ 1.21
NPHP4-206ENST00000468253 FAM205CA6NFA0 338 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 RRN3P2A6NIE6 340 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 DDX39AO00148 427 aaKnown RBP22.62■■□□□ 1.21
NPHP4-206ENST00000468253 PITPNM1O00562 1244 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 SLC37A4O43826 429 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 BAG4O95429 457 aaKnown RBP22.62■■□□□ 1.21
NPHP4-206ENST00000468253 TRAPPC10P48553 1259 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 JAK3P52333 1124 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 ADAM17P78536 824 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 RBL2Q08999 1139 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 ORC2Q13416 577 aaPredicted RBP22.62■■□□□ 1.21
NPHP4-206ENST00000468253 BFSP2Q13515 415 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 NOSTRINQ8IVI9 506 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 SLFN12Q8IYM2 578 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 TMEM199Q8N511 208 aa22.62■■□□□ 1.21
NPHP4-206ENST00000468253 CAGE1Q8TC20 777 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms