RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 JPH1Q9HDC5 661 aaPredicted RBP13.16□□□□□ -0.3
CDHR3-205ENST00000468143 SLC9A2Q9UBY0 812 aa13.16□□□□□ -0.3
CDHR3-205ENST00000468143 ZNF215Q9UL58 517 aaPredicted RBP13.16□□□□□ -0.3
CDHR3-205ENST00000468143 PFKFB2O60825 505 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 DEXIO95424 95 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 SELPP16109 830 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 THPOP40225 353 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 NEK4P51957 841 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 GPNMBQ14956 572 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 TRIM71Q2Q1W2 868 aaKnown RBP13.15□□□□□ -0.3
CDHR3-205ENST00000468143 ZNF618Q5T7W0 954 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 AFAP1L1Q8TED9 768 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 CRYGNQ8WXF5 182 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 TTYH1Q9H313 450 aaPredicted RBP13.15□□□□□ -0.3
CDHR3-205ENST00000468143 SEMA6BQ9H3T3 888 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 SH3GLB2Q9NR46 395 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.3
CDHR3-205ENST00000468143 IGLV3-22A0A075B6J6 115 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
CDHR3-205ENST00000468143 NBNO60934 754 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 LARGE1O95461 756 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 CTDNEP1O95476 244 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 PFKMP08237 780 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 CYP3A4P08684 503 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 DNAJB2P25686 324 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 RFC2P35250 354 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 RABGGTBP53611 331 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 ACTR2P61160 394 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 ANKRD1Q15327 319 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 PRR16Q569H4 304 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 MCTP2Q6DN12 878 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 SERINC5Q86VE9 423 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 PCYT2Q99447 389 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 PBX4Q9BYU1 374 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 MTIF3Q9H2K0 278 aaKnown RBP13.14□□□□□ -0.31
CDHR3-205ENST00000468143 SMARCAD1Q9H4L7 1026 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 GJB4Q9NTQ9 266 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 KCNJ14Q9UNX9 436 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
CDHR3-205ENST00000468143 NFASCO94856 1347 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 EDIL3O43854 480 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 CCNE2O96020 404 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 GNAT1P11488 350 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 ACTN1P12814 892 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 IGBP1P78318 339 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 ME3Q16798 604 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 TCTN1Q2MV58 587 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 LMBR1Q8WVP7 490 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 TIFAQ96CG3 184 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 ZBTB10Q96DT7 871 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 GUCD1Q96NT3 240 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 ZNF577Q9BSK1 485 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 AZI2Q9H6S1 392 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 ERAP1Q9NZ08 941 aa13.13□□□□□ -0.31
CDHR3-205ENST00000468143 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 IPO5O00410 1097 aaKnown RBP13.12□□□□□ -0.31
CDHR3-205ENST00000468143 DHX15O43143 795 aaKnown RBP13.12□□□□□ -0.31
CDHR3-205ENST00000468143 LGR5O75473 907 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 CDKL5O76039 1030 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 CTSHP09668 335 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 MYOGP15173 224 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 HOXC8P31273 242 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 STAT5BP51692 787 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 RBL2Q08999 1139 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 PPFIA1Q13136 1202 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 MBTPS1Q14703 1052 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 RUFY4Q6ZNE9 571 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 TBCKQ8TEA7 893 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 CDX2Q99626 313 aaPredicted RBP13.12□□□□□ -0.31
CDHR3-205ENST00000468143 OSBPL7Q9BZF2 842 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 NKX2-4Q9H2Z4 354 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 DOCK5Q9H7D0 1870 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 NRCAMQ92823 1304 aa13.12□□□□□ -0.31
CDHR3-205ENST00000468143 ATG7O95352 703 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 INSRRP14616 1297 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 ATP2A2P16615 1042 aaKnown RBP13.11□□□□□ -0.31
CDHR3-205ENST00000468143 ADAM17P78536 824 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 GRIN2CQ14957 1233 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 PLCB4Q15147 1175 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 NPY5RQ15761 445 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 GRIK4Q16099 956 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 SWSAP1Q6NVH7 229 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 TRMT1LQ7Z2T5 733 aaKnown RBP13.11□□□□□ -0.31
CDHR3-205ENST00000468143 TMCO2Q7Z6W1 182 aaPredicted RBP13.11□□□□□ -0.31
CDHR3-205ENST00000468143 MYLIPQ8WY64 445 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 GJA10Q969M2 543 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 ZNF576Q9H609 170 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
CDHR3-205ENST00000468143 MSRAQ9UJ68 235 aa13.11□□□□□ -0.31
CDHR3-205ENST00000468143 TRPC6Q9Y210 931 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms