RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PPP6R2O75170 966 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 CCNE2O96020 404 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 MMP3P08254 477 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 CAPN2P17655 700 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 PTGS1P23219 599 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 CST5P28325 142 aaPredicted RBP17.13■□□□□ 0.33
SNIP1-202ENST00000468040 TECP42680 631 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 DGKDQ16760 1214 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 MIS18BP1Q6P0N0 1132 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 ARRDC4Q8NCT1 418 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 TNPO1Q92973 898 aaKnown RBP17.13■□□□□ 0.33
SNIP1-202ENST00000468040 TMEM106CQ9BVX2 250 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 UNC45AQ9H3U1 944 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 SAMM50Q9Y512 469 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 PCDHA10Q9Y5I2 948 aa17.13■□□□□ 0.33
SNIP1-202ENST00000468040 DOCK5Q9H7D0 1870 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 VWA3AA6NCI4 1184 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 KPNA6O60684 536 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 PPFIA4O75335 1185 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 SGPL1O95470 568 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 HOXD8P13378 290 aaPredicted RBP17.12■□□□□ 0.33
SNIP1-202ENST00000468040 MARCKSP29966 332 aaPredicted RBP17.12■□□□□ 0.33
SNIP1-202ENST00000468040 SPIRE1Q08AE8 756 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 PDIA5Q14554 519 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 GNASQ5JWF2 1037 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 COL13A1Q5TAT6 717 aaPredicted RBP17.12■□□□□ 0.33
SNIP1-202ENST00000468040 NCAPH2Q6IBW4 605 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 MIER3Q7Z3K6 550 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 KRI1Q8N9T8 703 aaKnown RBP17.12■□□□□ 0.33
SNIP1-202ENST00000468040 PCSK9Q8NBP7 692 aaKnown RBP17.12■□□□□ 0.33
SNIP1-202ENST00000468040 KLHDC9Q8NEP7 349 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 SPATA32Q96LK8 384 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 CRISPLD2Q9H0B8 497 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 DISC1Q9NRI5 854 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 FBXO2Q9UK22 296 aaPredicted RBP17.12■□□□□ 0.33
SNIP1-202ENST00000468040 OGDHLQ9ULD0 1010 aa17.12■□□□□ 0.33
SNIP1-202ENST00000468040 SRPRBQ9Y5M8 271 aaKnown RBP17.12■□□□□ 0.33
SNIP1-202ENST00000468040 GSTTP1A0A1W2PQM5 241 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 POTEFA5A3E0 1075 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 CTAGE5O15320 804 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 ATG7O95352 703 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 PSAPP07602 524 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 SUPT20HL2P0C7V6 817 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 TCF7P36402 384 aaPredicted RBP17.11■□□□□ 0.33
SNIP1-202ENST00000468040 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
SNIP1-202ENST00000468040 GJA8P48165 433 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 LRRC41Q15345 812 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 IL17AQ16552 155 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 ERMNQ8TAM6 284 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 U2AF1L4Q8WU68 220 aaKnown RBP17.11■□□□□ 0.33
SNIP1-202ENST00000468040 LEO1Q8WVC0 666 aaPredicted RBP17.11■□□□□ 0.33
SNIP1-202ENST00000468040 AK8Q96MA6 479 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 LRWD1Q9UFC0 647 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
SNIP1-202ENST00000468040 MYADML2A6NDP7 307 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 POTEMA6NI47 508 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 DNM1LO00429 736 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
SNIP1-202ENST00000468040 ME1P48163 572 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 BEX3Q00994 111 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 EPHA7Q15375 998 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 CSPP1Q1MSJ5 1256 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 HAUS3Q68CZ6 603 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 ABHD15Q6UXT9 468 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 NEK9Q8TD19 979 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 CHAMP1Q96JM3 812 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 TSEN34Q9BSV6 310 aaKnown RBP17.1■□□□□ 0.33
SNIP1-202ENST00000468040 AZI2Q9H6S1 392 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 EMSYQ7Z589 1322 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 CENPFP49454 3210 aa17.1■□□□□ 0.33
SNIP1-202ENST00000468040 IGKV6D-21A0A0A0MT36 114 aa17.09■□□□□ 0.33
SNIP1-202ENST00000468040 MOXD2PA6NHM9 499 aa17.09■□□□□ 0.33
SNIP1-202ENST00000468040 KBTBD13C9JR72 458 aa17.09■□□□□ 0.33
SNIP1-202ENST00000468040 EML1O00423 815 aa17.09■□□□□ 0.33
SNIP1-202ENST00000468040 BACH1O14867 736 aa17.09■□□□□ 0.33
SNIP1-202ENST00000468040 TFRCP02786 760 aaKnown RBP17.09■□□□□ 0.33
SNIP1-202ENST00000468040 FAM160B1Q5W0V3 765 aa17.09■□□□□ 0.33
SNIP1-202ENST00000468040 ZNF579Q8NAF0 562 aaKnown RBP17.09■□□□□ 0.33
SNIP1-202ENST00000468040 ZNF215Q9UL58 517 aaPredicted RBP17.09■□□□□ 0.33
SNIP1-202ENST00000468040 TELO2Q9Y4R8 837 aa17.09■□□□□ 0.33
SNIP1-202ENST00000468040 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
SNIP1-202ENST00000468040 CUTAO60888 179 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 LGR5O75473 907 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 LGALS2P05162 132 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 MYL3P08590 195 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 SLC26A2P50443 739 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 IRX5P78411 483 aaPredicted RBP17.08■□□□□ 0.32
SNIP1-202ENST00000468040 KCNA10Q16322 511 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 KRT79Q5XKE5 535 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 CCSAPQ6IQ19 270 aaPredicted RBP17.08■□□□□ 0.32
SNIP1-202ENST00000468040 CLEC17AQ6ZS10 378 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 AFAP1L1Q8TED9 768 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 GLG1Q92896 1179 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 ATP6V0A1Q93050 837 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 GBP4Q96PP9 640 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 KATNAL1Q9BW62 490 aa17.08■□□□□ 0.32
SNIP1-202ENST00000468040 CSRNP2Q9H175 543 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms