RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 STXBP3O00186 592 aa16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 LPXNO60711 386 aa16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 GJB5O95377 273 aa16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 PARNO95453 639 aaKnown RBP16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 SYNE3Q6ZMZ3 975 aa16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 RUFY4Q6ZNE9 571 aa16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 ZBTB10Q96DT7 871 aa16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 JADE2Q9NQC1 790 aa16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 RBM28Q9NW13 759 aaKnown RBP16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 TMEM260Q9NX78 707 aa16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 NCOR1O75376 2440 aa16.94■□□□□ 0.3
ATPAF2-204ENST00000467560 SPDYE3A6NKU9 549 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 GOLGA8AA7E2F4 631 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 GOLGA8BA8MQT2 603 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 POU3F3P20264 500 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 ADD1P35611 737 aaKnown RBP16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 NAPAP54920 295 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 ARHGAP4P98171 946 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 GRB10Q13322 594 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 MTMR1Q13613 665 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 IKBKEQ14164 716 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 PLEKHG4Q58EX7 1191 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 TJAP1Q5JTD0 557 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 PCYT2Q99447 389 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 RIC8AQ9NPQ8 531 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
ATPAF2-204ENST00000467560 KIF28PB7ZC32 967 aa16.92■□□□□ 0.3
ATPAF2-204ENST00000467560 ARP10275 920 aa16.92■□□□□ 0.3
ATPAF2-204ENST00000467560 MARK3P27448 753 aa16.92■□□□□ 0.3
ATPAF2-204ENST00000467560 APOBRQ0VD83 1088 aa16.92■□□□□ 0.3
ATPAF2-204ENST00000467560 ZBED2Q9BTP6 218 aa16.92■□□□□ 0.3
ATPAF2-204ENST00000467560 KCNH7Q9NS40 1196 aa16.92■□□□□ 0.3
ATPAF2-204ENST00000467560 THEGQ9P2T0 379 aa16.92■□□□□ 0.3
ATPAF2-204ENST00000467560 ZNF215Q9UL58 517 aaPredicted RBP16.92■□□□□ 0.3
ATPAF2-204ENST00000467560 HSPA4P34932 840 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 TFF2Q03403 129 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 ITGB3BPQ13352 177 aaPredicted RBP16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 KRT32Q14532 448 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 MARCH8Q5T0T0 291 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 Q6ZUG5 572 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 SEPT1Q8WYJ6 367 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 CDHR1Q96JP9 859 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 JAKMIP1Q96N16 626 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 ASB2Q96Q27 587 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 RAD9AQ99638 391 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 MXRA8Q9BRK3 442 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 BARHL2Q9NY43 387 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 MTUS1Q9ULD2 1270 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 EMSYQ7Z589 1322 aa16.91■□□□□ 0.3
ATPAF2-204ENST00000467560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 LINC01553A4QN01 128 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 SMCO2A6NFE2 343 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 CHRNA1P02708 482 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 CLK2P49760 499 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 ADCY7P51828 1080 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 PPP1R18Q6NYC8 613 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 GDPD5Q8WTR4 605 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 ATXN2LQ8WWM7 1075 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 BRF1Q92994 677 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 ANO3Q9BYT9 981 aa16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 NAP1L2Q9ULW6 460 aaPredicted RBP16.9■□□□□ 0.3
ATPAF2-204ENST00000467560 EFCAB14O75071 495 aa16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 GNAT1P11488 350 aa16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 PPFIA1Q13136 1202 aa16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 GRIK4Q16099 956 aa16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 FAM26DQ5JW98 314 aa16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 MYOCDQ8IZQ8 938 aa16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 SUGCTQ9HAC7 445 aa16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 AGO4Q9HCK5 861 aaKnown RBP16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 JPH1Q9HDC5 661 aaPredicted RBP16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 NRCAMQ92823 1304 aa16.89■□□□□ 0.29
ATPAF2-204ENST00000467560 COL4A4P53420 1690 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 MBLAC1A4D2B0 266 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 CAND2O75155 1236 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 HMGB1P09429 215 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 ERVK-21P61565 698 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 MRPS5P82675 430 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 HTRA4P83105 476 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 MGAT3Q09327 533 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 PKN1Q16512 942 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 PFKFB3Q16875 520 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 CEP55Q53EZ4 464 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 JAKMIP3Q5VZ66 844 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 SEPT8Q92599 483 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 SYMPKQ92797 1274 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 GLG1Q92896 1179 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 UIMC1Q96RL1 719 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 C17orf80Q9BSJ5 609 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 ERAP1Q9NZ08 941 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 SLC9A2Q9UBY0 812 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 BRWD1Q9NSI6 2320 aa16.88■□□□□ 0.29
ATPAF2-204ENST00000467560 MICAL3Q7RTP6 2002 aa16.87■□□□□ 0.29
ATPAF2-204ENST00000467560 FAM86B1E9PN63 330 aa16.87■□□□□ 0.29
ATPAF2-204ENST00000467560 MEIS1O00470 390 aa16.87■□□□□ 0.29
ATPAF2-204ENST00000467560 MAFGO15525 162 aa16.87■□□□□ 0.29
ATPAF2-204ENST00000467560 GTPBP6O43824 516 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms