RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 ATP6V0A1Q93050 837 aa18.24■□□□□ 0.51
COL16A1-207ENST00000466829 GTF3C6Q969F1 213 aa18.24■□□□□ 0.51
COL16A1-207ENST00000466829 LLPHQ9BRT6 129 aaKnown RBP18.24■□□□□ 0.51
COL16A1-207ENST00000466829 ANO3Q9BYT9 981 aa18.24■□□□□ 0.51
COL16A1-207ENST00000466829 JADE2Q9NQC1 790 aa18.24■□□□□ 0.51
COL16A1-207ENST00000466829 TMEM260Q9NX78 707 aa18.24■□□□□ 0.51
COL16A1-207ENST00000466829 UBIAD1Q9Y5Z9 338 aa18.24■□□□□ 0.51
COL16A1-207ENST00000466829 MAFGO15525 162 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 ATP9AO75110 1047 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 PPFIA3O75145 1194 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 GNAT1P11488 350 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 FOSL2P15408 326 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 PDIA3P30101 505 aaKnown RBP18.23■□□□□ 0.51
COL16A1-207ENST00000466829 THPOP40225 353 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 RABGGTBP53611 331 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 JAKMIP3Q5VZ66 844 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 TRIM50Q86XT4 487 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 NECAB1Q8N987 351 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 DHX38Q92620 1227 aaKnown RBP18.23■□□□□ 0.51
COL16A1-207ENST00000466829 PHKBQ93100 1093 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 CTAGE1Q96RT6 745 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 SLC26A6Q9BXS9 759 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 SLC28A3Q9HAS3 691 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 C6orf50Q9HD87 102 aa18.23■□□□□ 0.51
COL16A1-207ENST00000466829 PARNO95453 639 aaKnown RBP18.22■□□□□ 0.51
COL16A1-207ENST00000466829 KCNA2P16389 499 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 TCF7P36402 384 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-207ENST00000466829 KCNJ6P48051 423 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 ST3GAL1Q11201 340 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 AP3B2Q13367 1082 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 TEX2Q8IWB9 1127 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 SEPT1Q8WYJ6 367 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 GLG1Q92896 1179 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 MXRA8Q9BRK3 442 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 SDF4Q9BRK5 362 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 NKX2-4Q9H2Z4 354 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 SETD4Q9NVD3 440 aa18.22■□□□□ 0.51
COL16A1-207ENST00000466829 CPLX1O14810 134 aa18.21■□□□□ 0.51
COL16A1-207ENST00000466829 PRPF3O43395 683 aaKnown RBP18.21■□□□□ 0.51
COL16A1-207ENST00000466829 ARHGAP4P98171 946 aa18.21■□□□□ 0.51
COL16A1-207ENST00000466829 GRIN2CQ14957 1233 aa18.21■□□□□ 0.51
COL16A1-207ENST00000466829 ZNF618Q5T7W0 954 aa18.21■□□□□ 0.51
COL16A1-207ENST00000466829 VWCEQ96DN2 955 aa18.21■□□□□ 0.51
COL16A1-207ENST00000466829 RNPEPQ9H4A4 650 aa18.21■□□□□ 0.51
COL16A1-207ENST00000466829 NCOA5Q9HCD5 579 aaKnown RBP18.21■□□□□ 0.51
COL16A1-207ENST00000466829 KCNH7Q9NS40 1196 aa18.21■□□□□ 0.51
COL16A1-207ENST00000466829 TELO2Q9Y4R8 837 aa18.21■□□□□ 0.51
COL16A1-207ENST00000466829 MYH7BA7E2Y1 1941 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 TREHO43280 583 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 MARK3P27448 753 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 GNA11P29992 359 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 SCRN1Q12765 414 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 STK3Q13188 491 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 HIC1Q14526 733 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 CEP55Q53EZ4 464 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 SERINC5Q86VE9 423 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 TRIM22Q8IYM9 498 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 MAFAQ8NHW3 353 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-207ENST00000466829 CYP2W1Q8TAV3 490 aa18.2■□□□□ 0.5
COL16A1-207ENST00000466829 JPH1Q9HDC5 661 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-207ENST00000466829 RSPH10B2B2RC85 870 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 KIF28PB7ZC32 967 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 BAIAP3O94812 1187 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 RSPH10BP0C881 870 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 PDCP20941 246 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 GJB2P29033 226 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 SREBF1P36956 1147 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 RBL2Q08999 1139 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 PPP2R2DQ66LE6 453 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 MCTP2Q6DN12 878 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 REXO1Q8N1G1 1221 aaKnown RBP18.19■□□□□ 0.5
COL16A1-207ENST00000466829 BICD2Q8TD16 824 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 WNT8BQ93098 351 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 SLC9A7Q96T83 725 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 GAS2L1Q99501 681 aaPredicted RBP18.19■□□□□ 0.5
COL16A1-207ENST00000466829 SMARCAD1Q9H4L7 1026 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 AZI2Q9H6S1 392 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 ERAP1Q9NZ08 941 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 SLC9A2Q9UBY0 812 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 YBX2Q9Y2T7 364 aaKnown RBP18.19■□□□□ 0.5
COL16A1-207ENST00000466829 PCDHA11Q9Y5I1 949 aa18.19■□□□□ 0.5
COL16A1-207ENST00000466829 GSTTP1A0A1W2PQM5 241 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 NBNO60934 754 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 ARP10275 920 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 MYOGP15173 224 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 IFNAR1P17181 557 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 HMGN5P82970 282 aaKnown RBP18.18■□□□□ 0.5
COL16A1-207ENST00000466829 SSRP1Q08945 709 aaKnown RBP18.18■□□□□ 0.5
COL16A1-207ENST00000466829 PKN1Q16512 942 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 TRIM71Q2Q1W2 868 aaKnown RBP18.18■□□□□ 0.5
COL16A1-207ENST00000466829 CNKSR3Q6P9H4 555 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
COL16A1-207ENST00000466829 CLEC17AQ6ZS10 378 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 CCDC148Q8NFR7 591 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 PHOSPHO2Q8TCD6 241 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 ZBED2Q9BTP6 218 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 RNF26Q9BY78 433 aaPredicted RBP18.18■□□□□ 0.5
COL16A1-207ENST00000466829 ZMYND12Q9H0C1 365 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 PRDM12Q9H4Q4 367 aa18.18■□□□□ 0.5
COL16A1-207ENST00000466829 KIF3AQ9Y496 699 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms