RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 GSTTP1A0A1W2PQM5 241 aa23.71■■□□□ 1.39
COL6A1-203ENST00000466285 EFCAB14O75071 495 aa23.71■■□□□ 1.39
COL6A1-203ENST00000466285 AMHP03971 560 aa23.71■■□□□ 1.39
COL6A1-203ENST00000466285 KIF5BP33176 963 aa23.71■■□□□ 1.39
COL6A1-203ENST00000466285 TCF7P36402 384 aaPredicted RBP23.71■■□□□ 1.39
COL6A1-203ENST00000466285 TMTC3Q6ZXV5 915 aa23.71■■□□□ 1.39
COL6A1-203ENST00000466285 USP26Q9BXU7 913 aa23.71■■□□□ 1.39
COL6A1-203ENST00000466285 CD320Q9NPF0 282 aa23.71■■□□□ 1.39
COL6A1-203ENST00000466285 SEC63Q9UGP8 760 aaKnown RBP23.71■■□□□ 1.39
COL6A1-203ENST00000466285 CNTNAP5Q8WYK1 1306 aa23.7■■□□□ 1.38
COL6A1-203ENST00000466285 UPP2O95045 317 aa23.7■■□□□ 1.38
COL6A1-203ENST00000466285 CHRNA1P02708 482 aa23.7■■□□□ 1.38
COL6A1-203ENST00000466285 MCM5P33992 734 aa23.7■■□□□ 1.38
COL6A1-203ENST00000466285 NECTIN1Q15223 517 aa23.7■■□□□ 1.38
COL6A1-203ENST00000466285 MICU3Q86XE3 530 aa23.7■■□□□ 1.38
COL6A1-203ENST00000466285 CUL5Q93034 780 aa23.7■■□□□ 1.38
COL6A1-203ENST00000466285 PGBD1Q96JS3 809 aa23.7■■□□□ 1.38
COL6A1-203ENST00000466285 COG5Q9UP83 839 aa23.7■■□□□ 1.38
COL6A1-203ENST00000466285 CCDC69A6NI79 296 aa23.69■■□□□ 1.38
COL6A1-203ENST00000466285 FBXO22Q8NEZ5 403 aa23.69■■□□□ 1.38
COL6A1-203ENST00000466285 SEPT8Q92599 483 aa23.69■■□□□ 1.38
COL6A1-203ENST00000466285 PCYT2Q99447 389 aa23.69■■□□□ 1.38
COL6A1-203ENST00000466285 SENP7Q9BQF6 1050 aa23.69■■□□□ 1.38
COL6A1-203ENST00000466285 EPHX3Q9H6B9 360 aa23.69■■□□□ 1.38
COL6A1-203ENST00000466285 UBIAD1Q9Y5Z9 338 aa23.69■■□□□ 1.38
COL6A1-203ENST00000466285 GHRP10912 638 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 SMARCA1P28370 1054 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 MGAT3Q09327 533 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 AAK1Q2M2I8 961 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 WWC2Q6AWC2 1192 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 GPRASP2Q96D09 838 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 TMEM87BQ96K49 555 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 PSTPIP2Q9H939 334 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 ANO2Q9NQ90 1003 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 INSL6Q9Y581 213 aa23.68■■□□□ 1.38
COL6A1-203ENST00000466285 LINC00271P0C7V0 271 aa23.67■■□□□ 1.38
COL6A1-203ENST00000466285 EPC2Q52LR7 807 aa23.67■■□□□ 1.38
COL6A1-203ENST00000466285 FAM26DQ5JW98 314 aa23.67■■□□□ 1.38
COL6A1-203ENST00000466285 MARCH8Q5T0T0 291 aa23.67■■□□□ 1.38
COL6A1-203ENST00000466285 HEATR3Q7Z4Q2 680 aa23.67■■□□□ 1.38
COL6A1-203ENST00000466285 CYP2W1Q8TAV3 490 aa23.67■■□□□ 1.38
COL6A1-203ENST00000466285 TOP1MTQ969P6 601 aa23.67■■□□□ 1.38
COL6A1-203ENST00000466285 UBE2ZQ9H832 354 aaPredicted RBP23.67■■□□□ 1.38
COL6A1-203ENST00000466285 ZNF215Q9UL58 517 aaPredicted RBP23.67■■□□□ 1.38
COL6A1-203ENST00000466285 CAND2O75155 1236 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 LIFRP42702 1097 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 LPIN1Q14693 890 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 NLRX1Q86UT6 975 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 LINC01599Q8WXQ3 324 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 YME1L1Q96TA2 773 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 LZTS2Q9BRK4 669 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 MTA3Q9BTC8 594 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 IFIH1Q9BYX4 1025 aaKnown RBP23.66■■□□□ 1.38
COL6A1-203ENST00000466285 LMCD1Q9NZU5 365 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 BRPF3Q9ULD4 1205 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 PCDHA6Q9UN73 950 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 PCDHA8Q9Y5H6 950 aa23.66■■□□□ 1.38
COL6A1-203ENST00000466285 ADAMTS3O15072 1205 aa23.65■■□□□ 1.38
COL6A1-203ENST00000466285 FUT2Q10981 343 aa23.65■■□□□ 1.38
COL6A1-203ENST00000466285 PPFIA1Q13136 1202 aa23.65■■□□□ 1.38
COL6A1-203ENST00000466285 MTMR1Q13613 665 aa23.65■■□□□ 1.38
COL6A1-203ENST00000466285 GRIK4Q16099 956 aa23.65■■□□□ 1.38
COL6A1-203ENST00000466285 XRRA1Q6P2D8 792 aa23.65■■□□□ 1.38
COL6A1-203ENST00000466285 FANCBQ8NB91 859 aa23.65■■□□□ 1.38
COL6A1-203ENST00000466285 EHMT1Q9H9B1 1298 aa23.65■■□□□ 1.38
COL6A1-203ENST00000466285 SLC12A7Q9Y666 1083 aa23.65■■□□□ 1.38
COL6A1-203ENST00000466285 C5orf42Q9H799 3197 aa23.64■■□□□ 1.38
COL6A1-203ENST00000466285 TTC3P53804 2025 aa23.64■■□□□ 1.38
COL6A1-203ENST00000466285 KCNA5P22460 613 aa23.64■■□□□ 1.37
COL6A1-203ENST00000466285 GNAQP50148 359 aa23.64■■□□□ 1.37
COL6A1-203ENST00000466285 ADCK5Q3MIX3 580 aa23.64■■□□□ 1.37
COL6A1-203ENST00000466285 APOA5Q6Q788 366 aa23.64■■□□□ 1.37
COL6A1-203ENST00000466285 SGMS1Q86VZ5 419 aa23.64■■□□□ 1.37
COL6A1-203ENST00000466285 RASEFQ8IZ41 740 aa23.64■■□□□ 1.37
COL6A1-203ENST00000466285 TRAPPC12Q8WVT3 735 aa23.64■■□□□ 1.37
COL6A1-203ENST00000466285 DNAJB3Q8WWF6 145 aa23.64■■□□□ 1.37
COL6A1-203ENST00000466285 RC3H2Q9HBD1 1191 aaKnown RBP23.64■■□□□ 1.37
COL6A1-203ENST00000466285 C11orf16Q9NQ32 467 aa23.64■■□□□ 1.37
COL6A1-203ENST00000466285 NRCAMQ92823 1304 aa23.63■■□□□ 1.37
COL6A1-203ENST00000466285 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.63■■□□□ 1.37
COL6A1-203ENST00000466285 IL9P15248 144 aa23.63■■□□□ 1.37
COL6A1-203ENST00000466285 IGBP1P78318 339 aa23.63■■□□□ 1.37
COL6A1-203ENST00000466285 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.63■■□□□ 1.37
COL6A1-203ENST00000466285 AGO3Q9H9G7 860 aaKnown RBP23.63■■□□□ 1.37
COL6A1-203ENST00000466285 JADE2Q9NQC1 790 aa23.63■■□□□ 1.37
COL6A1-203ENST00000466285 TMEM260Q9NX78 707 aa23.63■■□□□ 1.37
COL6A1-203ENST00000466285 TUBE1Q9UJT0 475 aa23.63■■□□□ 1.37
COL6A1-203ENST00000466285 MBLAC1A4D2B0 266 aaPredicted RBP23.62■■□□□ 1.37
COL6A1-203ENST00000466285 GNAT1P11488 350 aa23.62■■□□□ 1.37
COL6A1-203ENST00000466285 ITGB3BPQ13352 177 aaPredicted RBP23.62■■□□□ 1.37
COL6A1-203ENST00000466285 TMEM192Q8IY95 271 aa23.62■■□□□ 1.37
COL6A1-203ENST00000466285 SEPT1Q8WYJ6 367 aa23.62■■□□□ 1.37
COL6A1-203ENST00000466285 MRPL38Q96DV4 380 aaKnown RBP23.62■■□□□ 1.37
COL6A1-203ENST00000466285 CDY2AQ9Y6F7 541 aa23.62■■□□□ 1.37
COL6A1-203ENST00000466285 FAM86C2PA6NEL3 165 aa23.61■■□□□ 1.37
COL6A1-203ENST00000466285 CSPG5O95196 566 aa23.61■■□□□ 1.37
COL6A1-203ENST00000466285 CALM1P0DP23 149 aa23.61■■□□□ 1.37
COL6A1-203ENST00000466285 CALM2P0DP24 149 aa23.61■■□□□ 1.37
COL6A1-203ENST00000466285 CALM3P0DP25 149 aa23.61■■□□□ 1.37
COL6A1-203ENST00000466285 ARP10275 920 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms