RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 UBE3BQ7Z3V4 1068 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 TP53INP2Q8IXH6 220 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 FBXL18Q96ME1 805 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 CORO1BQ9BR76 489 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 EHD4Q9H223 541 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 MTIF3Q9H2K0 278 aaKnown RBP7.36□□□□□ -1.23
NCL-208ENST00000466274 SEMA6CQ9H3T2 930 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 TUT1Q9H6E5 874 aaKnown RBP7.36□□□□□ -1.23
NCL-208ENST00000466274 PHAXQ9H814 394 aaKnown RBP7.36□□□□□ -1.23
NCL-208ENST00000466274 LRRC4CQ9HCJ2 640 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 EGFL7Q9UHF1 273 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 MAP3K2Q9Y2U5 619 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 OTOFQ9HC10 1997 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 CDH23Q9H251 3354 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 ALPK3Q96L96 1907 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 MUC6Q6W4X9 2439 aa7.36□□□□□ -1.23
NCL-208ENST00000466274 UTYO14607 1347 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 KIAA0355O15063 1070 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 B3GALT4O96024 378 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 ASPAP45381 313 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 GYG1P46976 350 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 ATP2B2Q01814 1243 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 PPIGQ13427 754 aaKnown RBP eCLIP7.35□□□□□ -1.23
NCL-208ENST00000466274 MAP7Q14244 749 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 COL19A1Q14993 1142 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 TREML2Q5T2D2 321 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 KSR2Q6VAB6 950 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 LDHAL6AQ6ZMR3 332 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 ZNF765Q7L2R6 523 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 PLEKHH3Q7Z736 793 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 VSIG10LQ86VR7 867 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 GLYCTKQ8IVS8 523 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 EDC3Q96F86 508 aaKnown RBP7.35□□□□□ -1.23
NCL-208ENST00000466274 ASCC2Q9H1I8 757 aaPredicted RBP7.35□□□□□ -1.23
NCL-208ENST00000466274 ACSS3Q9H6R3 686 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.35□□□□□ -1.23
NCL-208ENST00000466274 CNNM1Q9NRU3 951 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 AP4E1Q9UPM8 1137 aa7.35□□□□□ -1.23
NCL-208ENST00000466274 DYNC1LI2O43237 492 aaPredicted RBP7.34□□□□□ -1.23
NCL-208ENST00000466274 IGKV5-2P06315 115 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 EPHB4P54760 987 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 ARHGAP4P98171 946 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 TLE2Q04725 743 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 GCKRQ14397 625 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 CCL14Q16627 93 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 CCDC57Q2TAC2 916 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 GJC2Q5T442 439 aaPredicted RBP7.34□□□□□ -1.23
NCL-208ENST00000466274 GPR142Q7Z601 462 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 ZSCAN29Q8IWY8 852 aaPredicted RBP7.34□□□□□ -1.23
NCL-208ENST00000466274 USP6NLQ92738 828 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 FAM84BQ96KN1 310 aaPredicted RBP7.34□□□□□ -1.23
NCL-208ENST00000466274 MYH16Q9H6N6 1097 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 NPHS2Q9NP85 383 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 TMEM39AQ9NV64 488 aa7.34□□□□□ -1.23
NCL-208ENST00000466274 ZC3H7BQ9UGR2 993 aaKnown RBP7.34□□□□□ -1.23
NCL-208ENST00000466274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.33□□□□□ -1.24
NCL-208ENST00000466274 DCDC2CA8MYV0 355 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 NEFLP07196 543 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 ZEB1P37275 1124 aaPredicted RBP7.33□□□□□ -1.24
NCL-208ENST00000466274 CCNA1P78396 465 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 SPP2Q13103 211 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 HP1BP3Q5SSJ5 553 aaPredicted RBP7.33□□□□□ -1.24
NCL-208ENST00000466274 CCDC30Q5VVM6 783 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 SEZ6L2Q6UXD5 910 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 ZFYVE1Q9HBF4 777 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 AS3MTQ9HBK9 375 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 C1GALT1Q9NS00 363 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 USP40Q9NVE5 1235 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 TMOD4Q9NZQ9 345 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 PPP1R9AQ9ULJ8 1098 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 NCOR1O75376 2440 aa7.33□□□□□ -1.24
NCL-208ENST00000466274 PI4KAP2A4QPH2 592 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 PQBP1O60828 265 aaKnown RBP7.32□□□□□ -1.24
NCL-208ENST00000466274 CPNE3O75131 537 aaKnown RBP7.32□□□□□ -1.24
NCL-208ENST00000466274 ENTPD3O75355 529 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 SLC5A1P13866 664 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 ITPKAP23677 461 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 ADCYAP1R1P41586 468 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 TMPOP42166 694 aaKnown RBP7.32□□□□□ -1.24
NCL-208ENST00000466274 HMGCS2P54868 508 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 CWF19L2Q2TBE0 894 aaKnown RBP7.32□□□□□ -1.24
NCL-208ENST00000466274 CDC42EP5Q6NZY7 148 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 PSRC1Q6PGN9 363 aaPredicted RBP7.32□□□□□ -1.24
NCL-208ENST00000466274 CBLL1Q75N03 491 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 ERMP1Q7Z2K6 904 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 TMEM199Q8N511 208 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 PI4KAP1Q8N8J0 262 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 SLC44A5Q8NCS7 719 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 TOX2Q96NM4 488 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 PRRX2Q99811 253 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.32□□□□□ -1.24
NCL-208ENST00000466274 WDR18Q9BV38 432 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 GSX1Q9H4S2 264 aaPredicted RBP7.32□□□□□ -1.24
NCL-208ENST00000466274 DAGLAQ9Y4D2 1042 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 IVNS1ABPQ9Y6Y0 642 aa7.32□□□□□ -1.24
NCL-208ENST00000466274 SLC15A5A6NIM6 579 aa7.31□□□□□ -1.24
NCL-208ENST00000466274 GRXCR1A8MXD5 290 aa7.31□□□□□ -1.24
NCL-208ENST00000466274 NDUFB5O43674 189 aa7.31□□□□□ -1.24
NCL-208ENST00000466274 TIMP1P01033 207 aa7.31□□□□□ -1.24
NCL-208ENST00000466274 POU3F3P20264 500 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms