RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 RPTORQ8N122 1335 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 SLC15A5A6NIM6 579 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 FAM155AB1AL88 458 aaPredicted RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 OPLAHO14841 1288 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 TRAK2O60296 914 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 DKC1O60832 514 aaKnown RBP eCLIP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 KINO60870 393 aaKnown RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 EIF3JO75822 258 aaKnown RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 GNRH1P01148 92 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 HOXC6P09630 235 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 ERCC3P19447 782 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 MCM7P33993 719 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 CEBPZQ03701 1054 aaKnown RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 FAM160A1Q05DH4 1040 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 ZNF174Q15697 407 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 STXBP2Q15833 593 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 UBE2SQ16763 222 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 FOXD4L6Q3SYB3 417 aaPredicted RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 NOM1Q5C9Z4 860 aaKnown RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 HAUS3Q68CZ6 603 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 FOXD4L3Q6VB84 417 aaPredicted RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 NSMFQ6X4W1 530 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 TRMT44Q8IYL2 757 aaKnown RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 RDM1Q8NG50 284 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 ERMNQ8TAM6 284 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 NEK9Q8TD19 979 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 GPRASP2Q96D09 838 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 SHISA4Q96DD7 197 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 MMP19Q99542 508 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 RIT2Q99578 217 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 MXRA8Q9BRK3 442 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 PAGR1Q9BTK6 254 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 MOV10L1Q9BXT6 1211 aaKnown RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 WDR11Q9BZH6 1224 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 NT5C3AQ9H0P0 336 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 A1CFQ9NQ94 594 aaKnown RBP6.78□□□□□ -1.32
CHMP3-206ENST00000466032 PXMP2Q9NR77 195 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 BTBD7Q9P203 1132 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 PCDHA7Q9UN72 937 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 PCDHA12Q9UN75 941 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 PCDHB6Q9Y5E3 794 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 PARP14Q460N5 1801 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 RLFQ13129 1914 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 MYH15Q9Y2K3 1946 aa6.78□□□□□ -1.32
CHMP3-206ENST00000466032 KDM3AQ9Y4C1 1321 aa6.77□□□□□ -1.32
CHMP3-206ENST00000466032 MEIS1O00470 390 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 NFIBO00712 420 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 CNMDO75829 334 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 CAVIN2O95810 425 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 NR3C2P08235 984 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 ATP2B1P20020 1258 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 HOXD10P28358 340 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 UBA7P41226 1012 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 MARSP56192 900 aaKnown RBP6.77□□□□□ -1.33
CHMP3-206ENST00000466032 SNAP25P60880 206 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 AMPD3Q01432 767 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 FMR1Q06787 632 aaKnown RBP eCLIP6.77□□□□□ -1.33
CHMP3-206ENST00000466032 BAATQ14032 418 aaPredicted RBP6.77□□□□□ -1.33
CHMP3-206ENST00000466032 KIF22Q14807 665 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 PGM5Q15124 567 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 MUM1L1Q5H9M0 696 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 EARS2Q5JPH6 523 aaKnown RBP6.77□□□□□ -1.33
CHMP3-206ENST00000466032 AXDND1Q5T1B0 1012 aaPredicted RBP6.77□□□□□ -1.33
CHMP3-206ENST00000466032 RESP18Q5W5W9 173 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 KRT79Q5XKE5 535 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 FAM173BQ6P4H8 233 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 PLEKHH3Q7Z736 793 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 VSIG10LQ86VR7 867 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 FCHSD1Q86WN1 690 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 PLA2G4DQ86XP0 818 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 HS6ST3Q8IZP7 471 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 C4orf32Q8N8J7 132 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 IGSF22Q8N9C0 903 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 IQUBQ8NA54 791 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 GALNT6Q8NCL4 622 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 RASGRP4Q8TDF6 673 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 SOCS4Q8WXH5 440 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 CALML4Q96GE6 196 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 MTMR9Q96QG7 549 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 SENP7Q9BQF6 1050 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 PDCD2LQ9BRP1 358 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 CCSER1Q9C0I3 900 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 KCNMB3Q9NPA1 279 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 JADE2Q9NQC1 790 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 HOMER2Q9NSB8 354 aa6.77□□□□□ -1.33
CHMP3-206ENST00000466032 FBXO2Q9UK22 296 aaPredicted RBP6.77□□□□□ -1.33
CHMP3-206ENST00000466032 DNAJC25-GNG10A0A024R161 153 aa6.76□□□□□ -1.33
CHMP3-206ENST00000466032 EDNRBP24530 442 aa6.76□□□□□ -1.33
CHMP3-206ENST00000466032 MARCKSP29966 332 aaPredicted RBP6.76□□□□□ -1.33
CHMP3-206ENST00000466032 HOXA13P31271 388 aaPredicted RBP6.76□□□□□ -1.33
CHMP3-206ENST00000466032 SFNP31947 248 aa6.76□□□□□ -1.33
CHMP3-206ENST00000466032 ICAM3P32942 547 aa6.76□□□□□ -1.33
CHMP3-206ENST00000466032 SYKP43405 635 aa6.76□□□□□ -1.33
CHMP3-206ENST00000466032 ALDH5A1P51649 535 aaPredicted RBP6.76□□□□□ -1.33
CHMP3-206ENST00000466032 PDE4DQ08499 809 aa6.76□□□□□ -1.33
CHMP3-206ENST00000466032 DGKZQ13574 1117 aa6.76□□□□□ -1.33
CHMP3-206ENST00000466032 MTMR1Q13613 665 aa6.76□□□□□ -1.33
CHMP3-206ENST00000466032 ZRSR1Q15695 479 aaKnown RBP6.76□□□□□ -1.33
CHMP3-206ENST00000466032 PRR16Q569H4 304 aa6.76□□□□□ -1.33
CHMP3-206ENST00000466032 CCDC183Q5T5S1 534 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms