RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 HDAC6Q9UBN7 1215 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 NOD1Q9Y239 953 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 LOXHD1Q8IVV2 1947 aa14.66□□□□□ -0.06
COL5A1-206ENST00000465877 DDX39AO00148 427 aaKnown RBP14.66□□□□□ -0.06
COL5A1-206ENST00000465877 CIITAP33076 1130 aa14.66□□□□□ -0.06
COL5A1-206ENST00000465877 PTGISQ16647 500 aa14.66□□□□□ -0.06
COL5A1-206ENST00000465877 PRR16Q569H4 304 aa14.66□□□□□ -0.06
COL5A1-206ENST00000465877 KRT25Q7Z3Z0 450 aa14.66□□□□□ -0.06
COL5A1-206ENST00000465877 ZSCAN31Q96LW9 406 aaPredicted RBP14.66□□□□□ -0.06
COL5A1-206ENST00000465877 CTAGE1Q96RT6 745 aa14.66□□□□□ -0.06
COL5A1-206ENST00000465877 TET1Q8NFU7 2136 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 MICAL3Q7RTP6 2002 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 CCDC194A0A1B0GVG4 234 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 GSTTP1A0A1W2PQM5 241 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 IPO5O00410 1097 aaKnown RBP14.65□□□□□ -0.06
COL5A1-206ENST00000465877 EDIL3O43854 480 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 SMIM10L2AP0DMW4 78 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 SMIM10L2BP0DMW5 78 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 HOXC8P31273 242 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 KRT2P35908 639 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 FXR1P51114 621 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL5A1-206ENST00000465877 FOSBP53539 338 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 EPHB4P54760 987 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 ACTR2P61160 394 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 PPIGQ13427 754 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL5A1-206ENST00000465877 NONOQ15233 471 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL5A1-206ENST00000465877 C9orf50Q5SZB4 431 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 TMEM199Q8N511 208 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 OXER1Q8TDS5 423 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 SEPT1Q8WYJ6 367 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 ZNF577Q9BSK1 485 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 BACH2Q9BYV9 841 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 BRMS1Q9HCU9 246 aa14.65□□□□□ -0.06
COL5A1-206ENST00000465877 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 CD2BP2O95400 341 aaKnown RBP14.64□□□□□ -0.07
COL5A1-206ENST00000465877 TDP2O95551 362 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 CCNE2O96020 404 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 MMP1P03956 469 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 CSF2RAP15509 400 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 USP11P51784 963 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 CCL23P55773 120 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 INF2Q27J81 1249 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 CCDC155Q8N6L0 562 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 CAGE1Q8TC20 777 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 UIMC1Q96RL1 719 aa14.64□□□□□ -0.07
COL5A1-206ENST00000465877 LLPHQ9BRT6 129 aaKnown RBP14.64□□□□□ -0.07
COL5A1-206ENST00000465877 C17orf102A2RUQ5 167 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 DHX15O43143 795 aaKnown RBP14.63□□□□□ -0.07
COL5A1-206ENST00000465877 LGR5O75473 907 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 MARK3P27448 753 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 HMGN5P82970 282 aaKnown RBP14.63□□□□□ -0.07
COL5A1-206ENST00000465877 NR5A1Q13285 461 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 BFSP2Q13515 415 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 TRIM29Q14134 588 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 HIC1Q14526 733 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 PSRC1Q6PGN9 363 aaPredicted RBP14.63□□□□□ -0.07
COL5A1-206ENST00000465877 MOXD1Q6UVY6 613 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 PIK3AP1Q6ZUJ8 805 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 IL27Q8NEV9 243 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 LMBR1Q8WVP7 490 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 DHX38Q92620 1227 aaKnown RBP14.63□□□□□ -0.07
COL5A1-206ENST00000465877 GLG1Q92896 1179 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 SCLYQ96I15 445 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 PCYT2Q99447 389 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 TBC1D22BQ9NU19 505 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 ERAP1Q9NZ08 941 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 TCEAL9Q9UHQ7 104 aa14.63□□□□□ -0.07
COL5A1-206ENST00000465877 CYP3A7-CYP3A51PA0A087WV96 503 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 FAM205CA6NFA0 338 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 SOX1O00570 391 aaPredicted RBP14.62□□□□□ -0.07
COL5A1-206ENST00000465877 MSH4O15457 936 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 CYP3A7P24462 503 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 ZNF200P98182 395 aaPredicted RBP14.62□□□□□ -0.07
COL5A1-206ENST00000465877 RBL2Q08999 1139 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 PTK7Q13308 1070 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 SHHQ15465 462 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 Q4G0T1 1027 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 KRT40Q6A162 431 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 NEK8Q86SG6 692 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 DIS3L2Q8IYB7 885 aaKnown RBP14.62□□□□□ -0.07
COL5A1-206ENST00000465877 AFAP1L1Q8TED9 768 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 TNFRSF25Q93038 417 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 WNT8BQ93098 351 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 RNPC3Q96LT9 517 aaKnown RBP14.62□□□□□ -0.07
COL5A1-206ENST00000465877 MBOAT7Q96N66 472 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL5A1-206ENST00000465877 SMARCAD1Q9H4L7 1026 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 AZI2Q9H6S1 392 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 IL23AQ9NPF7 189 aa14.62□□□□□ -0.07
COL5A1-206ENST00000465877 EVPLQ92817 2033 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 SLC37A4O43826 429 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 ATG7O95352 703 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 ACRP10323 421 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 KRT76Q01546 638 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 PPFIA1Q13136 1202 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 LETM2Q2VYF4 491 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 LRIT3Q3SXY7 679 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 EARS2Q5JPH6 523 aaKnown RBP14.61□□□□□ -0.07
COL5A1-206ENST00000465877 LRCH2Q5VUJ6 765 aa14.61□□□□□ -0.07
COL5A1-206ENST00000465877 ZNF746Q6NUN9 644 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms