RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 INTS4Q96HW7 963 aaKnown RBP5.33□□□□□ -1.56
SAMM50-202ENST00000465768 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.33□□□□□ -1.56
SAMM50-202ENST00000465768 SRPK3Q9UPE1 567 aa5.33□□□□□ -1.56
SAMM50-202ENST00000465768 SMARCA2P51531 1590 aa5.33□□□□□ -1.56
SAMM50-202ENST00000465768 ZNF891A8MT65 544 aaPredicted RBP5.32□□□□□ -1.56
SAMM50-202ENST00000465768 NKRFO15226 690 aaKnown RBP eCLIP5.32□□□□□ -1.56
SAMM50-202ENST00000465768 BRINP1O60477 761 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 MAFKO60675 156 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 PEX10O60683 326 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 GAS7O60861 476 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 TADA3O75528 432 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 HOXA5P20719 270 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 CDKN1CP49918 316 aaPredicted RBP5.32□□□□□ -1.56
SAMM50-202ENST00000465768 GALK1P51570 392 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 JAM2P57087 298 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 STRN3Q13033 797 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 SKOR2Q2VWA4 1001 aaPredicted RBP5.32□□□□□ -1.56
SAMM50-202ENST00000465768 STEAP3Q658P3 488 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 CREB3L3Q68CJ9 461 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 PAQR3Q6TCH7 311 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 DDX42Q86XP3 938 aaKnown RBP eCLIP5.32□□□□□ -1.56
SAMM50-202ENST00000465768 NOSTRINQ8IVI9 506 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 C2orf69Q8N8R5 385 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 SMC1BQ8NDV3 1235 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 SH3RF2Q8TEC5 729 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 BOCQ9BWV1 1114 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 PDGFDQ9GZP0 370 aaPredicted RBP5.32□□□□□ -1.56
SAMM50-202ENST00000465768 AP5M1Q9H0R1 490 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 SMOC1Q9H4F8 434 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 KCNK12Q9HB15 430 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 TYW1Q9NV66 732 aaKnown RBP5.32□□□□□ -1.56
SAMM50-202ENST00000465768 NUDT5Q9UKK9 219 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 APOBEC2Q9Y235 224 aaKnown RBP5.32□□□□□ -1.56
SAMM50-202ENST00000465768 NUB1Q9Y5A7 615 aa5.32□□□□□ -1.56
SAMM50-202ENST00000465768 PEG3Q9GZU2 1588 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 SLC12A8A0AV02 714 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 PTPDC1A2A3K4 754 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 MAN2B1O00754 1011 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 HGSO14964 777 aaPredicted RBP5.31□□□□□ -1.56
SAMM50-202ENST00000465768 HMGB1P09429 215 aaKnown RBP5.31□□□□□ -1.56
SAMM50-202ENST00000465768 COL6A2P12110 1019 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 CDK11BP21127 795 aaKnown RBP5.31□□□□□ -1.56
SAMM50-202ENST00000465768 PMLP29590 882 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 SCNN1BP51168 640 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 NR1I3Q14994 352 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 ARHGAP36Q6ZRI8 547 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 OSTM1Q86WC4 334 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 PTRH1Q86Y79 214 aaKnown RBP5.31□□□□□ -1.56
SAMM50-202ENST00000465768 SIRT2Q8IXJ6 389 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 NXPE1Q8N323 547 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 PRPF38AQ8NAV1 312 aaKnown RBP5.31□□□□□ -1.56
SAMM50-202ENST00000465768 USP7Q93009 1102 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 PEX11GQ96HA9 241 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 TTC1Q99614 292 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 PARD6AQ9NPB6 346 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 MYOTQ9UBF9 498 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 DSEQ9UL01 958 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 ZKSCAN5Q9Y2L8 839 aa5.31□□□□□ -1.56
SAMM50-202ENST00000465768 HMGXB3Q12766 1538 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 HRKO00198 91 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 RFXAPO00287 272 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 SGSM2O43147 1006 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 ZEB2O60315 1214 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 CLASP2O75122 1294 aaKnown RBP5.3□□□□□ -1.56
SAMM50-202ENST00000465768 MPOP05164 745 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 ZBTB48P10074 688 aaPredicted RBP5.3□□□□□ -1.56
SAMM50-202ENST00000465768 ATP2A2P16615 1042 aaKnown RBP5.3□□□□□ -1.56
SAMM50-202ENST00000465768 KRT15P19012 456 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 ADCYAP1R1P41586 468 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 LSSP48449 732 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 EPHA5P54756 1037 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 STAT4Q14765 748 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 PLEKHN1Q494U1 663 aaPredicted RBP5.3□□□□□ -1.56
SAMM50-202ENST00000465768 ADGRF1Q5T601 910 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 RPTNQ6XPR3 784 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 KCTD1Q719H9 257 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 NECAB2Q7Z6G3 386 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 NLGN4XQ8N0W4 816 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 TTLL11Q8NHH1 800 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 TSPAN17Q96FV3 270 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 MCOLN1Q9GZU1 580 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 IRF2BPLQ9H1B7 796 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 ASH2LQ9UBL3 628 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 PCDHB4Q9Y5E5 795 aa5.3□□□□□ -1.56
SAMM50-202ENST00000465768 BAZ1BQ9UIG0 1483 aaKnown RBP5.3□□□□□ -1.56
SAMM50-202ENST00000465768 RSF1Q96T23 1441 aaPredicted RBP5.3□□□□□ -1.56
SAMM50-202ENST00000465768 TEX51A0A1B0GUA7 166 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 TCRBV5S2A0A599 114 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 ZC3H12DA2A288 527 aaKnown RBP5.29□□□□□ -1.56
SAMM50-202ENST00000465768 OR14I1A6ND48 311 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 ALG1L2C9J202 215 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 NEMP1O14524 444 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 GPR39O43194 453 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 ZBTB7AO95365 584 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 GJA4P35212 333 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 MAPKAPK2P49137 400 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 IL2P60568 153 aa5.29□□□□□ -1.56
SAMM50-202ENST00000465768 YBX1P67809 324 aaKnown RBP5.29□□□□□ -1.56
SAMM50-202ENST00000465768 DLG4P78352 724 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms