RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 TDP2O95551 362 aa8.78□□□□□ -1
THBS3-205ENST00000465596 PSEN2P49810 448 aa8.78□□□□□ -1
THBS3-205ENST00000465596 USP11P51784 963 aa8.78□□□□□ -1
THBS3-205ENST00000465596 NLRP5P59047 1200 aa8.78□□□□□ -1
THBS3-205ENST00000465596 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
THBS3-205ENST00000465596 CUL4AQ13619 759 aa8.78□□□□□ -1
THBS3-205ENST00000465596 TRIM71Q2Q1W2 868 aaKnown RBP8.78□□□□□ -1
THBS3-205ENST00000465596 KRT40Q6A162 431 aa8.78□□□□□ -1
THBS3-205ENST00000465596 GDF6Q6KF10 455 aaPredicted RBP8.78□□□□□ -1
THBS3-205ENST00000465596 TRAF7Q6Q0C0 670 aa8.78□□□□□ -1
THBS3-205ENST00000465596 NLRX1Q86UT6 975 aa8.78□□□□□ -1
THBS3-205ENST00000465596 SLC5A5Q92911 643 aa8.78□□□□□ -1
THBS3-205ENST00000465596 CDHR1Q96JP9 859 aa8.78□□□□□ -1
THBS3-205ENST00000465596 SEZ6LQ9BYH1 1024 aa8.78□□□□□ -1
THBS3-205ENST00000465596 EHMT1Q9H9B1 1298 aa8.78□□□□□ -1
THBS3-205ENST00000465596 KCNMB3Q9NPA1 279 aa8.78□□□□□ -1
THBS3-205ENST00000465596 TRMT13Q9NUP7 481 aaKnown RBP8.78□□□□□ -1
THBS3-205ENST00000465596 GTF2IRD1Q9UHL9 959 aa8.78□□□□□ -1
THBS3-205ENST00000465596 COLQQ9Y215 455 aaPredicted RBP8.78□□□□□ -1
THBS3-205ENST00000465596 COL4A4P53420 1690 aaPredicted RBP8.78□□□□□ -1
THBS3-205ENST00000465596 FNDC1Q4ZHG4 1894 aaPredicted RBP8.77□□□□□ -1.01
THBS3-205ENST00000465596 TTC3P53804 2025 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 KIF28PB7ZC32 967 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 IPO5O00410 1097 aaKnown RBP8.77□□□□□ -1.01
THBS3-205ENST00000465596 MSH4O15457 936 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 PSMD10O75832 226 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 TCF7P36402 384 aaPredicted RBP8.77□□□□□ -1.01
THBS3-205ENST00000465596 ACTR2P61160 394 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 SETQ01105 290 aaPredicted RBP8.77□□□□□ -1.01
THBS3-205ENST00000465596 SPIRE1Q08AE8 756 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 MFSD10Q14728 455 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 GPNMBQ14956 572 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 INF2Q27J81 1249 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 KIAA0753Q2KHM9 967 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 Q4G0T1 1027 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 ABHD15Q6UXT9 468 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 CHRDL2Q6WN34 429 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 C16orf59Q7L2K0 433 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 KRT25Q7Z3Z0 450 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 PLA2G4DQ86XP0 818 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 GIMAP8Q8ND71 665 aaPredicted RBP8.77□□□□□ -1.01
THBS3-205ENST00000465596 GJA10Q969M2 543 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 JPH1Q9HDC5 661 aaPredicted RBP8.77□□□□□ -1.01
THBS3-205ENST00000465596 PKD2L1Q9P0L9 805 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 HDAC6Q9UBN7 1215 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 SLC9A2Q9UBY0 812 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 VAV3Q9UKW4 847 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 A0A0C4DFX4 3053 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 VCANP13611 3396 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 IGSF9BQ9UPX0 1349 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 RALGAPA2Q2PPJ7 1873 aa8.77□□□□□ -1.01
THBS3-205ENST00000465596 DCDC2CA8MYV0 355 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 ZBTB42B2RXF5 422 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 BTBD18B2RXH4 712 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 H3BRB1 525 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 ST18O60284 1047 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 TIMP1P01033 207 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 CYP2C9P11712 490 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 ATP4AP20648 1035 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 ZNF200P98182 395 aaPredicted RBP8.76□□□□□ -1.01
THBS3-205ENST00000465596 MDM2Q00987 491 aaPredicted RBP8.76□□□□□ -1.01
THBS3-205ENST00000465596 NONOQ15233 471 aaKnown RBP eCLIP8.76□□□□□ -1.01
THBS3-205ENST00000465596 PRR16Q569H4 304 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 MARCH8Q5T0T0 291 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 RASIP1Q5U651 963 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 PPP4R3AQ6IN85 833 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 SERINC5Q86VE9 423 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 CCDC60Q8IWA6 550 aaPredicted RBP8.76□□□□□ -1.01
THBS3-205ENST00000465596 DIS3L2Q8IYB7 885 aaKnown RBP8.76□□□□□ -1.01
THBS3-205ENST00000465596 FBXO18Q8NFZ0 1043 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 WASF1Q92558 559 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 HAS1Q92839 578 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 BADQ92934 168 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 UIMC1Q96RL1 719 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 RNPEPQ9H4A4 650 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 TUT1Q9H6E5 874 aaKnown RBP8.76□□□□□ -1.01
THBS3-205ENST00000465596 MLXIPQ9HAP2 919 aa8.76□□□□□ -1.01
THBS3-205ENST00000465596 UPF2Q9HAU5 1272 aaKnown RBP8.76□□□□□ -1.01
THBS3-205ENST00000465596 A0A1W2PPC1 479 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 MBLAC1A4D2B0 266 aaPredicted RBP8.75□□□□□ -1.01
THBS3-205ENST00000465596 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 STBD1O95210 358 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 SMIM10L2AP0DMW4 78 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 SMIM10L2BP0DMW5 78 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 U2AF2P26368 475 aaKnown RBP eCLIP8.75□□□□□ -1.01
THBS3-205ENST00000465596 CYP2C18P33260 490 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 KRT2P35908 639 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 MCM2P49736 904 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 HMGN5P82970 282 aaKnown RBP8.75□□□□□ -1.01
THBS3-205ENST00000465596 SP4Q02446 784 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 MKRN4PQ13434 485 aaPredicted RBP8.75□□□□□ -1.01
THBS3-205ENST00000465596 MBTPS1Q14703 1052 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 UGCGQ16739 394 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 BRDTQ58F21 947 aaPredicted RBP8.75□□□□□ -1.01
THBS3-205ENST00000465596 C9orf50Q5SZB4 431 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 MFSD5Q6N075 450 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 ZNF746Q6NUN9 644 aaPredicted RBP8.75□□□□□ -1.01
THBS3-205ENST00000465596 PIK3AP1Q6ZUJ8 805 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 NEK8Q86SG6 692 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 AFAP1L1Q8TED9 768 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms