RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 BARHL2Q9NY43 387 aa17.08■□□□□ 0.32
MRPL55-225ENST00000465268 NAP1L2Q9ULW6 460 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-225ENST00000465268 TANC1Q9C0D5 1861 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 SMCO2A6NFE2 343 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 LGR5O75473 907 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 MARK3P27448 753 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 KCNJ6P48051 423 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 CLK2P49760 499 aaKnown RBP17.07■□□□□ 0.32
MRPL55-225ENST00000465268 ARHGAP4P98171 946 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 LMBR1Q8WVP7 490 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 MXRA8Q9BRK3 442 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 ANO3Q9BYT9 981 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 XIRP2A4UGR9 3374 aa17.07■□□□□ 0.32
MRPL55-225ENST00000465268 ABHD14A-ACY1A0A1B0GW23 586 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 TLL1O43897 1013 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 PARNO95453 639 aaKnown RBP17.06■□□□□ 0.32
MRPL55-225ENST00000465268 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
MRPL55-225ENST00000465268 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 METAP2P50579 478 aaKnown RBP eCLIP17.06■□□□□ 0.32
MRPL55-225ENST00000465268 ADCY7P51828 1080 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 PKN1Q16512 942 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 PPP1R18Q6NYC8 613 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 FAM117BQ6P1L5 589 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 ARNTL2Q8WYA1 636 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 SEPT1Q8WYJ6 367 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 KCNH7Q9NS40 1196 aa17.06■□□□□ 0.32
MRPL55-225ENST00000465268 REV3LO60673 3130 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 ITGB3BPQ13352 177 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-225ENST00000465268 IKBKEQ14164 716 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 PFKFB3Q16875 520 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-225ENST00000465268 PLEKHG4Q58EX7 1191 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 MARCH8Q5T0T0 291 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 JAKMIP3Q5VZ66 844 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 BLOC1S2Q6QNY1 142 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 MICALL1Q8N3F8 863 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 GIMAP8Q8ND71 665 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-225ENST00000465268 PHKBQ93100 1093 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 CDHR1Q96JP9 859 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 UIMC1Q96RL1 719 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 AGXT2Q9BYV1 514 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 ZNF215Q9UL58 517 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-225ENST00000465268 MYH7BA7E2Y1 1941 aa17.05■□□□□ 0.32
MRPL55-225ENST00000465268 GBF1Q92538 1859 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 KIF28PB7ZC32 967 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 LPXNO60711 386 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 GJB5O95377 273 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 CHRNA1P02708 482 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 RCAN1P53805 252 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 FGD1P98174 961 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 NTRK3Q16288 839 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 AGO4Q9HCK5 861 aaKnown RBP17.04■□□□□ 0.32
MRPL55-225ENST00000465268 MTCH2Q9Y6C9 303 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 CUL9Q8IWT3 2517 aa17.04■□□□□ 0.32
MRPL55-225ENST00000465268 TRIP12Q14669 1992 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-225ENST00000465268 NRCAMQ92823 1304 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 FAM86B1E9PN63 330 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 MEIS1O00470 390 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 MAFGO15525 162 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 FAM86B2P0C5J1 330 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 SCG2P13521 617 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 SREBF1P36956 1147 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 PPFIA1Q13136 1202 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 GRIK4Q16099 956 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 CEP55Q53EZ4 464 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 FAM26DQ5JW98 314 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 FBXL16Q8N461 479 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 CRYGNQ8WXF5 182 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 LARP6Q9BRS8 491 aaKnown RBP17.03■□□□□ 0.32
MRPL55-225ENST00000465268 ZBED2Q9BTP6 218 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 NCOA5Q9HCD5 579 aaKnown RBP17.03■□□□□ 0.32
MRPL55-225ENST00000465268 JPH1Q9HDC5 661 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-225ENST00000465268 MUC3AQ02505 3323 aa17.03■□□□□ 0.32
MRPL55-225ENST00000465268 NID2Q14112 1375 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 EMSYQ7Z589 1322 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 DOCK5Q9H7D0 1870 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-225ENST00000465268 hCG_1984214I3L0E3 225 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 EDIL3O43854 480 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 CCNE2O96020 404 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 FOSP01100 380 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-225ENST00000465268 GNAT1P11488 350 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 ACTR2P61160 394 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 MGAT3Q09327 533 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 GRB10Q13322 594 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 TOB2Q14106 344 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-225ENST00000465268 ZNF713Q8N859 430 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-225ENST00000465268 RASGRP4Q8TDF6 673 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 GLG1Q92896 1179 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 RAD9AQ99638 391 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 ERAP1Q9NZ08 941 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.32
MRPL55-225ENST00000465268 MBLAC1A4D2B0 266 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-225ENST00000465268 LINC01553A4QN01 128 aa17.01■□□□□ 0.31
MRPL55-225ENST00000465268 DDX39AO00148 427 aaKnown RBP17.01■□□□□ 0.31
MRPL55-225ENST00000465268 PRPF3O43395 683 aaKnown RBP17.01■□□□□ 0.31
MRPL55-225ENST00000465268 CAND2O75155 1236 aa17.01■□□□□ 0.31
MRPL55-225ENST00000465268 INSRRP14616 1297 aa17.01■□□□□ 0.31
MRPL55-225ENST00000465268 POU3F3P20264 500 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-225ENST00000465268 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
MRPL55-225ENST00000465268 IGBP1P78318 339 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms