RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 FOXR2Q6PJQ5 311 aa20.67■□□□□ 0.9
TSPAN4-210ENST00000464987 SECISBP2LQ93073 1101 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-210ENST00000464987 DEF6Q9H4E7 631 aa20.67■□□□□ 0.9
TSPAN4-210ENST00000464987 PSME4Q14997 1843 aa20.67■□□□□ 0.9
TSPAN4-210ENST00000464987 OAS2P29728 719 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 GFPT1Q06210 699 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 SMC1AQ14683 1233 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 HGSNATQ68CP4 663 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 CACNA2D4Q7Z3S7 1137 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 CNKSR1Q969H4 720 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 IQCDQ96DY2 449 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 REEP2Q9BRK0 252 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.66■□□□□ 0.92e-8■■■■■ 42.5
TSPAN4-210ENST00000464987 SALL4Q9UJQ4 1053 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 RSPH10B2B2RC85 870 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 PDE2AO00408 941 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 EML1O00423 815 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 MAP2K7O14733 419 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 AKR1B10O60218 316 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 MOCS3O95396 460 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 RSPH10BP0C881 870 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 RPA1P27694 616 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 CC2D2BQ6DHV5 1058 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 BTNL9Q6UXG8 535 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 CDAN1Q8IWY9 1227 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 EHBP1Q8NDI1 1231 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 HNRNPLLQ8WVV9 542 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 SH2D4AQ9H788 454 aa20.66■□□□□ 0.9
TSPAN4-210ENST00000464987 TLR2O60603 784 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 ADAM9Q13443 819 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 ASTE1Q2TB18 679 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 TRIM59Q8IWR1 403 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 ZFP91Q96JP5 570 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 DRC1Q96MC2 740 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 LSM14BQ9BX40 385 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 TNS1Q9HBL0 1735 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 RGL1Q9NZL6 768 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 VAV3Q9UKW4 847 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 POTEB2H3BUK9 544 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 LCA5LO95447 670 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 HOXD13P35453 343 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 SFR1Q86XK3 245 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 ANKRD13CQ8N6S4 541 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 SYT2Q8N9I0 419 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 CEP63Q96MT8 703 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 JADE2Q9NQC1 790 aa20.65■□□□□ 0.9
TSPAN4-210ENST00000464987 PITPNM2Q9BZ72 1349 aa20.64■□□□□ 0.9
TSPAN4-210ENST00000464987 H3BQF6 201 aa20.64■□□□□ 0.89
TSPAN4-210ENST00000464987 TBX3O15119 743 aa20.64■□□□□ 0.89
TSPAN4-210ENST00000464987 POLD1P28340 1107 aa20.64■□□□□ 0.89
TSPAN4-210ENST00000464987 HOXA7P31268 230 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-210ENST00000464987 L1RE1Q9UN81 338 aa20.64■□□□□ 0.89
TSPAN4-210ENST00000464987 DNM3Q9UQ16 869 aa20.64■□□□□ 0.89
TSPAN4-210ENST00000464987 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.64■□□□□ 0.89
TSPAN4-210ENST00000464987 UTRNP46939 3433 aa20.64■□□□□ 0.89
TSPAN4-210ENST00000464987 RAD17O75943 681 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 MYBP10242 640 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 CIITAP33076 1130 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 POLR2FP61218 127 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 UBXN2AP68543 259 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 FAM83BQ5T0W9 1011 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 RBBP6Q7Z6E9 1792 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 PRPF6O94906 941 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 FOSP01100 380 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 STAT2P52630 851 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 MARSP56192 900 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 CCDC174Q6PII3 467 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 WDR18Q9BV38 432 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 RUSC1Q9BVN2 902 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 TSGA10Q9BZW7 698 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 BHMT2Q9H2M3 363 aa20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 ZBTB12Q9Y330 459 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-210ENST00000464987 IGLV3-22A0A075B6J6 115 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 USO1O60763 962 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 CFBP00751 764 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 NR2F2P24468 414 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 ZNF76P36508 570 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 ZYXQ15942 572 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 TDRD12Q587J7 1177 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 SAMD1Q6SPF0 538 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 ZC3H3Q8IXZ2 948 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 ERMNQ8TAM6 284 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 EIF2AK1Q9BQI3 630 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 PDGFDQ9GZP0 370 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 CEP72Q9P209 647 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 COL4A5P29400 1685 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 ANO9A1A5B4 782 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 SPDYE2BA6NHP3 402 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 SPDYE6P0CI01 402 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 MAGEA1P43355 309 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 USP14P54578 494 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 GYS2P54840 703 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 TUBB4BP68371 445 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 RASSF7Q02833 373 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 KCNA1Q09470 495 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 FAM20AQ96MK3 541 aa20.62■□□□□ 0.89
TSPAN4-210ENST00000464987 SFI1A8K8P3 1242 aa20.61■□□□□ 0.89
TSPAN4-210ENST00000464987 ZBTB39O15060 712 aa20.61■□□□□ 0.89
TSPAN4-210ENST00000464987 KCNH2Q12809 1159 aa20.61■□□□□ 0.89
TSPAN4-210ENST00000464987 CTTNQ14247 550 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms