RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 GNAT1P11488 350 aa29.56■■■□□ 2.32
U2AF1-206ENST00000464750 CLK2P49760 499 aaKnown RBP29.56■■■□□ 2.32
U2AF1-206ENST00000464750 WDR5P61964 334 aaKnown RBP29.56■■■□□ 2.32
U2AF1-206ENST00000464750 HERC6Q8IVU3 1022 aa29.56■■■□□ 2.32
U2AF1-206ENST00000464750 SEPT1Q8WYJ6 367 aa29.56■■■□□ 2.32
U2AF1-206ENST00000464750 CHD7Q9P2D1 2997 aa29.56■■■□□ 2.32
U2AF1-206ENST00000464750 MICAL3Q7RTP6 2002 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 GSTTP1A0A1W2PQM5 241 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 CA3P07451 260 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 SREBF1P36956 1147 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 TCTN1Q2MV58 587 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 CYP2W1Q8TAV3 490 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 LMBR1Q8WVP7 490 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 JPH1Q9HDC5 661 aaPredicted RBP29.55■■■□□ 2.32
U2AF1-206ENST00000464750 KCNH7Q9NS40 1196 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 PPP4R2Q9NY27 417 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 PRUNE2Q8WUY3 3088 aa29.55■■■□□ 2.32
U2AF1-206ENST00000464750 EMSYQ7Z589 1322 aa29.54■■■□□ 2.32
U2AF1-206ENST00000464750 RSPH10B2B2RC85 870 aa29.54■■■□□ 2.32
U2AF1-206ENST00000464750 RBAK-RBAKDNI3L0D1 243 aa29.54■■■□□ 2.32
U2AF1-206ENST00000464750 RSPH10BP0C881 870 aa29.54■■■□□ 2.32
U2AF1-206ENST00000464750 ARHGAP4P98171 946 aa29.54■■■□□ 2.32
U2AF1-206ENST00000464750 RUFY3Q7L099 469 aa29.54■■■□□ 2.32
U2AF1-206ENST00000464750 PHKBQ93100 1093 aa29.54■■■□□ 2.32
U2AF1-206ENST00000464750 A0A0C4DFX4 3053 aa29.53■■■□□ 2.32
U2AF1-206ENST00000464750 ESYT2A0FGR8 921 aa29.53■■■□□ 2.32
U2AF1-206ENST00000464750 PRPF3O43395 683 aaKnown RBP29.53■■■□□ 2.32
U2AF1-206ENST00000464750 PKN1Q16512 942 aa29.53■■■□□ 2.32
U2AF1-206ENST00000464750 CEP55Q53EZ4 464 aa29.53■■■□□ 2.32
U2AF1-206ENST00000464750 JAKMIP3Q5VZ66 844 aa29.53■■■□□ 2.32
U2AF1-206ENST00000464750 NRCAMQ92823 1304 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 ABHD14A-ACY1A0A1B0GW23 586 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 KIF28PB7ZC32 967 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 CAND2O75155 1236 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 LGR5O75473 907 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 CTSHP09668 335 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 MARK3P27448 753 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 ADAM17P78536 824 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 DEFB103AP81534 67 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 ADGRE1Q14246 886 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 CCDC12Q8WUD4 166 aaPredicted RBP29.52■■■□□ 2.32
U2AF1-206ENST00000464750 GLG1Q92896 1179 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 SDF4Q9BRK5 362 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 ZSWIM6Q9HCJ5 1215 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 ERAP1Q9NZ08 941 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 SLC9A2Q9UBY0 812 aa29.52■■■□□ 2.32
U2AF1-206ENST00000464750 NFASCO94856 1347 aa29.51■■■□□ 2.32
U2AF1-206ENST00000464750 DLL1O00548 723 aa29.51■■■□□ 2.31
U2AF1-206ENST00000464750 ARP10275 920 aa29.51■■■□□ 2.31
U2AF1-206ENST00000464750 EVCP57679 992 aa29.51■■■□□ 2.31
U2AF1-206ENST00000464750 AKAP17AQ02040 695 aaKnown RBP29.51■■■□□ 2.31
U2AF1-206ENST00000464750 NTRK3Q16288 839 aa29.51■■■□□ 2.31
U2AF1-206ENST00000464750 USP38Q8NB14 1042 aa29.51■■■□□ 2.31
U2AF1-206ENST00000464750 ZMYND12Q9H0C1 365 aa29.51■■■□□ 2.31
U2AF1-206ENST00000464750 SMARCAD1Q9H4L7 1026 aa29.51■■■□□ 2.31
U2AF1-206ENST00000464750 C6orf50Q9HD87 102 aa29.51■■■□□ 2.31
U2AF1-206ENST00000464750 SIP14410 1827 aa29.5■■■□□ 2.31
U2AF1-206ENST00000464750 EFCAB14O75071 495 aa29.5■■■□□ 2.31
U2AF1-206ENST00000464750 PPFIA3O75145 1194 aa29.5■■■□□ 2.31
U2AF1-206ENST00000464750 PDIA3P30101 505 aaKnown RBP29.5■■■□□ 2.31
U2AF1-206ENST00000464750 ZNF76P36508 570 aa29.5■■■□□ 2.31
U2AF1-206ENST00000464750 CCT2P78371 535 aaKnown RBP29.5■■■□□ 2.31
U2AF1-206ENST00000464750 PPFIA1Q13136 1202 aa29.5■■■□□ 2.31
U2AF1-206ENST00000464750 TOB2Q14106 344 aaPredicted RBP29.5■■■□□ 2.31
U2AF1-206ENST00000464750 IKBKEQ14164 716 aa29.5■■■□□ 2.31
U2AF1-206ENST00000464750 TMCO2Q7Z6W1 182 aaPredicted RBP29.5■■■□□ 2.31
U2AF1-206ENST00000464750 SLC26A6Q9BXS9 759 aa29.5■■■□□ 2.31
U2AF1-206ENST00000464750 RNF26Q9BY78 433 aaPredicted RBP29.5■■■□□ 2.31
U2AF1-206ENST00000464750 NCOA5Q9HCD5 579 aaKnown RBP29.5■■■□□ 2.31
U2AF1-206ENST00000464750 AGO4Q9HCK5 861 aaKnown RBP29.5■■■□□ 2.31
U2AF1-206ENST00000464750 CYP46A1Q9Y6A2 500 aa29.5■■■□□ 2.31
U2AF1-206ENST00000464750 MEIS1O00470 390 aa29.49■■■□□ 2.31
U2AF1-206ENST00000464750 ADAMTS3O15072 1205 aa29.49■■■□□ 2.31
U2AF1-206ENST00000464750 TLL1O43897 1013 aa29.49■■■□□ 2.31
U2AF1-206ENST00000464750 IFNAR1P17181 557 aa29.49■■■□□ 2.31
U2AF1-206ENST00000464750 IGFBP4P22692 258 aa29.49■■■□□ 2.31
U2AF1-206ENST00000464750 ITGB3BPQ13352 177 aaPredicted RBP29.49■■■□□ 2.31
U2AF1-206ENST00000464750 REXO1Q8N1G1 1221 aaKnown RBP29.49■■■□□ 2.31
U2AF1-206ENST00000464750 DBF4BQ8NFT6 615 aa29.49■■■□□ 2.31
U2AF1-206ENST00000464750 ARHGEF15O94989 841 aa29.48■■■□□ 2.31
U2AF1-206ENST00000464750 GRIK4Q16099 956 aa29.48■■■□□ 2.31
U2AF1-206ENST00000464750 PCYT2Q99447 389 aa29.48■■■□□ 2.31
U2AF1-206ENST00000464750 UPF3BQ9BZI7 483 aaKnown RBP29.48■■■□□ 2.31
U2AF1-206ENST00000464750 TM6SF1Q9BZW5 370 aa29.48■■■□□ 2.31
U2AF1-206ENST00000464750 CUL9Q8IWT3 2517 aa29.48■■■□□ 2.31
U2AF1-206ENST00000464750 ACTR2P61160 394 aa29.47■■■□□ 2.31
U2AF1-206ENST00000464750 PLEKHG4Q58EX7 1191 aa29.47■■■□□ 2.31
U2AF1-206ENST00000464750 ERICH6BQ5W0A0 696 aa29.47■■■□□ 2.31
U2AF1-206ENST00000464750 NIPA1Q7RTP0 329 aa29.47■■■□□ 2.31
U2AF1-206ENST00000464750 PPM1EQ8WY54 764 aa29.47■■■□□ 2.31
U2AF1-206ENST00000464750 ZBED2Q9BTP6 218 aa29.47■■■□□ 2.31
U2AF1-206ENST00000464750 AZI2Q9H6S1 392 aa29.47■■■□□ 2.31
U2AF1-206ENST00000464750 CERS4Q9HA82 394 aa29.47■■■□□ 2.31
U2AF1-206ENST00000464750 COL4A4P53420 1690 aaPredicted RBP29.47■■■□□ 2.31
U2AF1-206ENST00000464750 FAM86B1E9PN63 330 aa29.46■■■□□ 2.31
U2AF1-206ENST00000464750 FAM86B2P0C5J1 330 aa29.46■■■□□ 2.31
U2AF1-206ENST00000464750 GNA11P29992 359 aa29.46■■■□□ 2.31
U2AF1-206ENST00000464750 TAP1Q03518 808 aa29.46■■■□□ 2.31
U2AF1-206ENST00000464750 MCTP2Q6DN12 878 aa29.46■■■□□ 2.31
U2AF1-206ENST00000464750 RUFY4Q6ZNE9 571 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms