RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 MSCO60682 206 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 FGRP09769 529 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 FAHP16930 419 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 EPHB4P54760 987 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 GPR85P60893 370 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 ICAM4Q14773 271 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 SKIDA1Q1XH10 827 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 LBX2Q6XYB7 198 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 SPRED1Q7Z699 444 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.91□□□□□ -1.62
GARNL3-213ENST00000464616 RBM12BQ8IXT5 1001 aaKnown RBP4.91□□□□□ -1.62
GARNL3-213ENST00000464616 SLC16A11Q8NCK7 471 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 WDR48Q8TAF3 677 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 CLEC4DQ8WXI8 215 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 CDC6Q99741 560 aa4.91□□□□□ -1.62
GARNL3-213ENST00000464616 PPARGC1AQ9UBK2 798 aaKnown RBP4.91□□□□□ -1.62
GARNL3-213ENST00000464616 H0Y858 1186 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 MUSKO15146 869 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 SOD2P04179 222 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 CHGBP05060 677 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 PABPC1P11940 636 aaKnown RBP4.9□□□□□ -1.63
GARNL3-213ENST00000464616 SELENOPP49908 381 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 PFKPQ01813 784 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 KCNT2Q6UVM3 1135 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 DPP8Q6V1X1 898 aaPredicted RBP4.9□□□□□ -1.63
GARNL3-213ENST00000464616 MTDHQ86UE4 582 aaKnown RBP4.9□□□□□ -1.63
GARNL3-213ENST00000464616 MCF2L2Q86YR7 1114 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 CELF2-AS1Q8N7Q2 184 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 STPG3Q8N7X2 389 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 DTX3Q8N9I9 347 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 NUDT10Q8NFP7 164 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 UHMK1Q8TAS1 419 aaKnown RBP4.9□□□□□ -1.63
GARNL3-213ENST00000464616 NUDT11Q96G61 164 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 LRRC37BQ96QE4 947 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 LMF1Q96S06 567 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 VPS11Q9H270 941 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 HSPBP1Q9NZL4 362 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 ARHGAP28Q9P2N2 729 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 ADAM29Q9UKF5 820 aa4.9□□□□□ -1.63
GARNL3-213ENST00000464616 GPR42O15529 346 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 FZD7O75084 574 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 ZNF623O75123 536 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 LTFP02788 710 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 FGFR1P11362 822 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 TACR2P21452 398 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 HMGA2P52926 109 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 ST5P78524 1137 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 PKN3Q6P5Z2 889 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 Q6ZUG5 572 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 KCTD1Q719H9 257 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 GPR155Q7Z3F1 870 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 CKAP2LQ8IYA6 745 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 NLGN4XQ8N0W4 816 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 ST13P5Q8NFI4 369 aaPredicted RBP4.89□□□□□ -1.63
GARNL3-213ENST00000464616 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.89□□□□□ -1.63
GARNL3-213ENST00000464616 MBD6Q96DN6 1003 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 SSBP3Q9BWW4 388 aaPredicted RBP4.89□□□□□ -1.63
GARNL3-213ENST00000464616 ZNF341Q9BYN7 854 aa4.89□□□□□ -1.63
GARNL3-213ENST00000464616 AQP7O14520 342 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 STK10O94804 968 aaKnown RBP4.88□□□□□ -1.63
GARNL3-213ENST00000464616 AMHP03971 560 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 USP10Q14694 798 aaKnown RBP4.88□□□□□ -1.63
GARNL3-213ENST00000464616 BTBD8Q5XKL5 378 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 CD276Q5ZPR3 534 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 ZNF428Q96B54 188 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 C8orf37Q96NL8 207 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 PTPN18Q99952 460 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 TACO1Q9BSH4 297 aaKnown RBP4.88□□□□□ -1.63
GARNL3-213ENST00000464616 TINF2Q9BSI4 451 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 SEC61A2Q9H9S3 476 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 CATSPERZQ9NTU4 200 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 RIC8BQ9NVN3 520 aa4.88□□□□□ -1.63
GARNL3-213ENST00000464616 BLACEA4D250 179 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 GSTA4O15217 222 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 NKRFO15226 690 aaKnown RBP eCLIP4.87□□□□□ -1.63
GARNL3-213ENST00000464616 KLHL18O94889 574 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 NAT1P18440 290 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 RAC3P60763 192 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 PAK1Q13153 545 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 PRKD1Q15139 912 aaPredicted RBP4.87□□□□□ -1.63
GARNL3-213ENST00000464616 STYK1Q6J9G0 422 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 REXO1L1PQ8IX06 675 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 CARD11Q9BXL7 1154 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 CDIP1Q9H305 208 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 IPPKQ9H8X2 491 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 ARHGEF4Q9NR80 690 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 IGSF5Q9NSI5 407 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 WASF3Q9UPY6 502 aa4.87□□□□□ -1.63
GARNL3-213ENST00000464616 ESYT3A0FGR9 886 aa4.86□□□□□ -1.63
GARNL3-213ENST00000464616 CCDC85CA6NKD9 419 aa4.86□□□□□ -1.63
GARNL3-213ENST00000464616 ZNF839A8K0R7 811 aa4.86□□□□□ -1.63
GARNL3-213ENST00000464616 CYR61O00622 381 aa4.86□□□□□ -1.63
GARNL3-213ENST00000464616 KNG1P01042 644 aa4.86□□□□□ -1.63
GARNL3-213ENST00000464616 ZC3H6P61129 1189 aaKnown RBP4.86□□□□□ -1.63
GARNL3-213ENST00000464616 WDR72Q3MJ13 1102 aa4.86□□□□□ -1.63
GARNL3-213ENST00000464616 MTERF2Q49AM1 385 aa4.86□□□□□ -1.63
GARNL3-213ENST00000464616 ZMAT1Q5H9K5 638 aa4.86□□□□□ -1.63
GARNL3-213ENST00000464616 ZFPM1Q8IX07 1006 aa4.86□□□□□ -1.63
GARNL3-213ENST00000464616 SLC43A3Q8NBI5 491 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms