RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PCDHA6Q9UN73 950 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 PCDHA8Q9Y5H6 950 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 FHOD1Q9Y613 1164 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 ADGRB2O60241 1585 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 PNPLA7Q6ZV29 1317 aa9.88□□□□□ -0.83
HPS4-208ENST00000464362 CCDC160A6NGH7 325 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 ACSL3O95573 720 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 MYL1P05976 194 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 TRIM49P0CI25 452 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 TRIM49CP0CI26 452 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 GUCY1A3Q02108 690 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 NTRK3Q16288 839 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 CHURC1Q8WUH1 139 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 MAP3K14Q99558 947 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.87□□□□□ -0.83
HPS4-208ENST00000464362 ANKFY1Q9P2R3 1169 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 CCPG1Q9ULG6 757 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 ZNF148Q9UQR1 794 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 HPSEQ9Y251 543 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 HNRNPDLO14979 420 aaKnown RBP9.87□□□□□ -0.83
HPS4-208ENST00000464362 RAD17O75943 681 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 ACTN1P12814 892 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 PSMC2P35998 433 aaKnown RBP9.87□□□□□ -0.83
HPS4-208ENST00000464362 SESN3P58005 492 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 SEPT2Q15019 361 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 TRIM68Q6AZZ1 485 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 SMC6Q96SB8 1091 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 LACRTQ9GZZ8 138 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 SH2D4AQ9H788 454 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 CLTCQ00610 1675 aaKnown RBP9.87□□□□□ -0.83
HPS4-208ENST00000464362 A0A087WUV0 522 aaPredicted RBP9.87□□□□□ -0.83
HPS4-208ENST00000464362 LRRIQ4A6NIV6 560 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 GH2P01242 217 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 GRAPQ13588 217 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 C12orf60Q5U649 245 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 HIBCHQ6NVY1 386 aaPredicted RBP9.87□□□□□ -0.83
HPS4-208ENST00000464362 APBB1IPQ7Z5R6 666 aaPredicted RBP9.87□□□□□ -0.83
HPS4-208ENST00000464362 DNAAF5Q86Y56 855 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 GRAPLQ8TC17 118 aaPredicted RBP9.87□□□□□ -0.83
HPS4-208ENST00000464362 MAK16Q9BXY0 300 aaKnown RBP9.87□□□□□ -0.83
HPS4-208ENST00000464362 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.87□□□□□ -0.83
HPS4-208ENST00000464362 CAPN11Q9UMQ6 739 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 MYOM1P52179 1685 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 MYO5BQ9ULV0 1848 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 PNMA6FA0A0J9YX94 578 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 FERP16591 822 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 NFIXQ14938 502 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 ADGRA1Q86SQ6 560 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 FMNL3Q8IVF7 1028 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 CCDC13Q8IYE1 715 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 GDAP1Q8TB36 358 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 FMO2Q99518 471 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 AMACRQ9UHK6 382 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 EXOC7Q9UPT5 735 aa9.87□□□□□ -0.83
HPS4-208ENST00000464362 BMP3P12645 472 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 EMBQ6PCB8 327 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 GLYCTKQ8IVS8 523 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 RGL1Q9NZL6 768 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 TXNDC16Q9P2K2 825 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 COL15A1P39059 1388 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 A0A1B0GUA9 196 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 MYMKA6NI61 221 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 MYO1FO00160 1098 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 APBA3O96018 575 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 H2AFXP16104 143 aaPredicted RBP9.86□□□□□ -0.83
HPS4-208ENST00000464362 GCLMP48507 274 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 ATP11AP98196 1134 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 GRM4Q14833 912 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 DDX42Q86XP3 938 aaKnown RBP eCLIP9.86□□□□□ -0.83
HPS4-208ENST00000464362 OR2W6PQ8NHA6 318 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 MYCBPQ99417 103 aaPredicted RBP9.86□□□□□ -0.83
HPS4-208ENST00000464362 TEKT3Q9BXF9 490 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 TRIM7Q9C029 511 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.86□□□□□ -0.83
HPS4-208ENST00000464362 PPEF1O14829 653 aaPredicted RBP9.86□□□□□ -0.83
HPS4-208ENST00000464362 GCFC2P16383 781 aaKnown RBP9.86□□□□□ -0.83
HPS4-208ENST00000464362 ATP5DP30049 168 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 HSPA1LP34931 641 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 KCNJ6P48051 423 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 PDE6CP51160 858 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 CASP7P55210 303 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 RASA3Q14644 834 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 EFCAB13Q8IY85 973 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 ZNF34Q8IZ26 560 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 ARHGEF1Q92888 912 aaKnown RBP9.86□□□□□ -0.83
HPS4-208ENST00000464362 MXD3Q9BW11 206 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 PLA2G12BQ9BX93 195 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 FUT8Q9BYC5 575 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 PARVGQ9HBI0 331 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 C1orf112Q9NSG2 853 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 CHORDC1Q9UHD1 332 aaPredicted RBP9.86□□□□□ -0.83
HPS4-208ENST00000464362 DNAJC12Q9UKB3 198 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 CNTNAP5Q8WYK1 1306 aa9.86□□□□□ -0.83
HPS4-208ENST00000464362 VEGFAP15692 232 aaPredicted RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 EIF2AK2P19525 551 aaKnown RBP9.85□□□□□ -0.83
HPS4-208ENST00000464362 PEX19P40855 299 aa9.85□□□□□ -0.83
HPS4-208ENST00000464362 LIG4P49917 911 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms