RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ERVFC1P60507 584 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 CTR9Q6PD62 1173 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 STK11IPQ8N1F8 1099 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 CHMP4CQ96CF2 233 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 ACSF2Q96CM8 615 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-211ENST00000463372 CEP95Q96GE4 821 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 TBC1D17Q9HA65 648 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 WNT16Q9UBV4 365 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 GMEB2Q9UKD1 530 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 PRR12Q9ULL5 1215 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 LHX6Q9UPM6 363 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 SIT1Q9Y3P8 196 aa15.84■□□□□ 0.13
C9orf3-211ENST00000463372 DENND4AQ7Z401 1863 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-211ENST00000463372 TCRBV5S4A2TA0A5A2 114 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 PLA2G6O60733 806 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 TGM1P22735 817 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 ZNF528Q3MIS6 628 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 SPOUT1Q5T280 376 aaKnown RBP15.83■□□□□ 0.12
C9orf3-211ENST00000463372 PLPP4Q5VZY2 271 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 PPTC7Q8NI37 304 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 GMCL1Q96IK5 515 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 AAASQ9NRG9 546 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 TMEM260Q9NX78 707 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 MTMR4Q9NYA4 1195 aa15.83■□□□□ 0.12
C9orf3-211ENST00000463372 IGKV6D-41A0A0C4DH26 115 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 KRBA1A5PL33 1030 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 FSCN2O14926 492 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 TREHO43280 583 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 EOMESO95936 686 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 CFHP08603 1231 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 WEE2P0C1S8 567 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 MCCP23508 829 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 LAMC2Q13753 1193 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 ATAT1Q5SQI0 421 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 N4BP2L1Q5TBK1 243 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-211ENST00000463372 XRRA1Q6P2D8 792 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 UNQ6494/PRO21346Q6UXR6 183 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 EMID1Q96A84 441 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-211ENST00000463372 ARPP21Q9UBL0 812 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-211ENST00000463372 PCDHGA2Q9Y5H1 932 aa15.82■□□□□ 0.12
C9orf3-211ENST00000463372 FGF18O76093 207 aa15.81■□□□□ 0.12
C9orf3-211ENST00000463372 GHRP10912 638 aa15.81■□□□□ 0.12
C9orf3-211ENST00000463372 RPS6P62753 249 aaKnown RBP15.81■□□□□ 0.12
C9orf3-211ENST00000463372 KCTD1Q719H9 257 aa15.81■□□□□ 0.12
C9orf3-211ENST00000463372 THNSL1Q8IYQ7 743 aa15.81■□□□□ 0.12
C9orf3-211ENST00000463372 ZNF444Q8N0Y2 327 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-211ENST00000463372 KCNK12Q9HB15 430 aa15.81■□□□□ 0.12
C9orf3-211ENST00000463372 PARD6AQ9NPB6 346 aa15.81■□□□□ 0.12
C9orf3-211ENST00000463372 ENTPD7Q9NQZ7 604 aa15.81■□□□□ 0.12
C9orf3-211ENST00000463372 CA14Q9ULX7 337 aa15.81■□□□□ 0.12
C9orf3-211ENST00000463372 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.81■□□□□ 0.12
C9orf3-211ENST00000463372 SLC4A4Q9Y6R1 1079 aa15.81■□□□□ 0.12
C9orf3-211ENST00000463372 FNDC1Q4ZHG4 1894 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-211ENST00000463372 C1QTNF9BB2RNN3 333 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 PPFIA4O75335 1185 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 C1QTNF9P0C862 333 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 STAG3L1P0CL83 205 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 RING1Q06587 406 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 ALDH1L2Q3SY69 923 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 FAM26DQ5JW98 314 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 KIAA1841Q6NSI8 718 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 NPAS4Q8IUM7 802 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 KDF1Q8NAX2 398 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-211ENST00000463372 API5Q9BZZ5 524 aaKnown RBP15.8■□□□□ 0.12
C9orf3-211ENST00000463372 EPC1Q9H2F5 836 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 DLGAP2Q9P1A6 1054 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 BPTFQ12830 3046 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 PATJQ8NI35 1801 aa15.8■□□□□ 0.12
C9orf3-211ENST00000463372 POTEMA6NI47 508 aa15.79■□□□□ 0.12
C9orf3-211ENST00000463372 NARSO43776 548 aaKnown RBP15.79■□□□□ 0.12
C9orf3-211ENST00000463372 GNAI2P04899 355 aa15.79■□□□□ 0.12
C9orf3-211ENST00000463372 SPEM2Q0P670 501 aa15.79■□□□□ 0.12
C9orf3-211ENST00000463372 RARS2Q5T160 578 aaKnown RBP15.79■□□□□ 0.12
C9orf3-211ENST00000463372 RCSD1Q6JBY9 416 aa15.79■□□□□ 0.12
C9orf3-211ENST00000463372 POTEGQ6S5H5 508 aa15.79■□□□□ 0.12
C9orf3-211ENST00000463372 OTOP3Q7RTS5 596 aa15.79■□□□□ 0.12
C9orf3-211ENST00000463372 EAF2Q96CJ1 260 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-211ENST00000463372 TCF25Q9BQ70 676 aa15.79■□□□□ 0.12
C9orf3-211ENST00000463372 PUF60Q9UHX1 559 aaKnown RBP15.79■□□□□ 0.12
C9orf3-211ENST00000463372 FBXO4Q9UKT5 387 aa15.79■□□□□ 0.12
C9orf3-211ENST00000463372 MYH7P12883 1935 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 LOXHD1Q8IVV2 1947 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 ZBED9Q6R2W3 1325 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 LAMTOR5O43504 91 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 TBC1D4O60343 1298 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 SURF6O75683 361 aaKnown RBP15.78■□□□□ 0.12
C9orf3-211ENST00000463372 SMIM10L2AP0DMW4 78 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 SMIM10L2BP0DMW5 78 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 GNAT1P11488 350 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 RARSP54136 660 aaKnown RBP15.78■□□□□ 0.12
C9orf3-211ENST00000463372 APOBRQ0VD83 1088 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 PHLDB3Q6NSJ2 640 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 MAML2Q8IZL2 1156 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-211ENST00000463372 GPR20Q99678 358 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 ZNF287Q9HBT7 754 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 NGRNQ9NPE2 291 aaKnown RBP15.78■□□□□ 0.12
C9orf3-211ENST00000463372 IGSF9Q9P2J2 1179 aa15.78■□□□□ 0.12
C9orf3-211ENST00000463372 DDX41Q9UJV9 622 aaKnown RBP15.78■□□□□ 0.12
C9orf3-211ENST00000463372 HCFC2Q9Y5Z7 792 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms