RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ERVK-24P63145 666 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 TRIM65Q6PJ69 517 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 B3GNT9Q6UX72 402 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 SYT10Q6XYQ8 523 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 CNGA4Q8IV77 575 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 NOC4LQ9BVI4 516 aaKnown RBP14.23□□□□□ -0.13
VAPB-203ENST00000463370 KCNH7Q9NS40 1196 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 A0A1W2PQC6 194 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 EIF2AK2P19525 551 aaKnown RBP14.23□□□□□ -0.13
VAPB-203ENST00000463370 GTF2F1P35269 517 aaKnown RBP eCLIP14.23□□□□□ -0.13
VAPB-203ENST00000463370 GHRHRQ02643 423 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 LRRC63Q05C16 580 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 SYCP1Q15431 976 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 TRERF1Q96PN7 1200 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 EHMT1Q9H9B1 1298 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 MRPL44Q9H9J2 332 aaKnown RBP14.23□□□□□ -0.13
VAPB-203ENST00000463370 SPON1Q9HCB6 807 aa14.23□□□□□ -0.13
VAPB-203ENST00000463370 PITPNM2Q9BZ72 1349 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 KRT9P35527 623 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 TBC1D8BQ0IIM8 1120 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 SFR1Q86XK3 245 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 REPS2Q8NFH8 660 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 KCTD10Q9H3F6 313 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 RABGAP1Q9Y3P9 1069 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 SFI1A8K8P3 1242 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 ZBED4O75132 1171 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 EYA4O95677 639 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 FECHP22830 423 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 HOXD13P35453 343 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 DNM2P50570 870 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 SETQ01105 290 aaPredicted RBP14.22□□□□□ -0.13
VAPB-203ENST00000463370 ITGB3BPQ13352 177 aaPredicted RBP14.22□□□□□ -0.13
VAPB-203ENST00000463370 MCF2L2Q86YR7 1114 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 FAM114A1Q8IWE2 563 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 TTYH3Q9C0H2 523 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 AGPAT5Q9NUQ2 364 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 PAXBP1Q9Y5B6 917 aa14.22□□□□□ -0.13
VAPB-203ENST00000463370 DHX15O43143 795 aaKnown RBP14.21□□□□□ -0.13
VAPB-203ENST00000463370 RINT1Q6NUQ1 792 aa14.21□□□□□ -0.13
VAPB-203ENST00000463370 NSMFQ6X4W1 530 aa14.21□□□□□ -0.13
VAPB-203ENST00000463370 CCDC155Q8N6L0 562 aa14.21□□□□□ -0.13
VAPB-203ENST00000463370 BANK1Q8NDB2 785 aa14.21□□□□□ -0.13
VAPB-203ENST00000463370 CHP1Q99653 195 aa14.21□□□□□ -0.13
VAPB-203ENST00000463370 AS3MTQ9HBK9 375 aa14.21□□□□□ -0.13
VAPB-203ENST00000463370 USP2O75604 605 aaPredicted RBP14.2□□□□□ -0.14
VAPB-203ENST00000463370 MYBP10242 640 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 TKFCQ3LXA3 575 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 VWA3BQ502W6 1294 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.2□□□□□ -0.14
VAPB-203ENST00000463370 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 TUFT1Q9NNX1 390 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 CTDP1Q9Y5B0 961 aaPredicted RBP14.2□□□□□ -0.14
VAPB-203ENST00000463370 UBIAD1Q9Y5Z9 338 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 ADGRG1Q9Y653 693 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 DOCK1Q14185 1865 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 ADM5C9JUS6 153 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 TRAF5O00463 557 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 EPHB6O15197 1021 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 ZSCAN12O43309 604 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 PEX10O60683 326 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 TPM1P09493 284 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 YBX3P16989 372 aaKnown RBP eCLIP14.2□□□□□ -0.141e-7■□□□□ 9.9
VAPB-203ENST00000463370 ETF1P62495 437 aaKnown RBP14.2□□□□□ -0.14
VAPB-203ENST00000463370 RBM10P98175 930 aaKnown RBP14.2□□□□□ -0.14
VAPB-203ENST00000463370 KCNA1Q09470 495 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 TRIM14Q14142 442 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 PGM5Q15124 567 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 PCNX4Q63HM2 1172 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 ACRBPQ8NEB7 543 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 KIF18AQ8NI77 898 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 CCDC51Q96ER9 411 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 C12orf42Q96LP6 360 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 LXNQ9BS40 222 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 TEKT3Q9BXF9 490 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 NAA15Q9BXJ9 866 aaKnown RBP14.2□□□□□ -0.14
VAPB-203ENST00000463370 IRX2Q9BZI1 471 aaPredicted RBP14.2□□□□□ -0.14
VAPB-203ENST00000463370 IKZF4Q9H2S9 585 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 NDST4Q9H3R1 872 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 RNF146Q9NTX7 359 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 RNF181Q9P0P0 153 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 ZNF214Q9UL59 606 aaPredicted RBP14.2□□□□□ -0.14
VAPB-203ENST00000463370 STK24Q9Y6E0 443 aa14.2□□□□□ -0.14
VAPB-203ENST00000463370 DYNC1I1O14576 645 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 ABL1P00519 1130 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 MYCLP12524 364 aaPredicted RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 BAATQ14032 418 aaPredicted RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 TMEM132BQ14DG7 1078 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 SNRNP48Q6IEG0 339 aaKnown RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 WDR59Q6PJI9 974 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 RNF207Q6ZRF8 634 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 C1orf186Q6ZWK4 172 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 RMDN3Q96TC7 470 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 TSG101Q99816 390 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 AGO4Q9HCK5 861 aaKnown RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 DNAI1Q9UI46 699 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 CAPN11Q9UMQ6 739 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 AFG3L2Q9Y4W6 797 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 FRMPD4Q14CM0 1322 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 CCP110O43303 1012 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms