RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ANTXR2P58335 489 aa22.78■■□□□ 1.24
VARS-221ENST00000463184 ARHGAP4P98171 946 aa22.78■■□□□ 1.24
VARS-221ENST00000463184 GPM6BQ13491 265 aa22.78■■□□□ 1.24
VARS-221ENST00000463184 PUS10Q3MIT2 529 aaKnown RBP22.78■■□□□ 1.24
VARS-221ENST00000463184 TIGD5Q53EQ6 642 aa22.78■■□□□ 1.24
VARS-221ENST00000463184 TRIM50Q86XT4 487 aa22.78■■□□□ 1.24
VARS-221ENST00000463184 FAM178BQ8IXR5 827 aa22.78■■□□□ 1.24
VARS-221ENST00000463184 MB21D2Q8IYB1 491 aaPredicted RBP22.78■■□□□ 1.24
VARS-221ENST00000463184 LMBR1Q8WVP7 490 aa22.78■■□□□ 1.24
VARS-221ENST00000463184 LZTS2Q9BRK4 669 aa22.78■■□□□ 1.24
VARS-221ENST00000463184 IFIH1Q9BYX4 1025 aaKnown RBP22.78■■□□□ 1.24
VARS-221ENST00000463184 CD320Q9NPF0 282 aa22.78■■□□□ 1.24
VARS-221ENST00000463184 SEC63Q9UGP8 760 aaKnown RBP22.78■■□□□ 1.24
VARS-221ENST00000463184 GNAQP50148 359 aa22.77■■□□□ 1.24
VARS-221ENST00000463184 RPAINQ86UA6 219 aa22.77■■□□□ 1.24
VARS-221ENST00000463184 ZNF654Q8IZM8 581 aa22.77■■□□□ 1.24
VARS-221ENST00000463184 BANK1Q8NDB2 785 aa22.77■■□□□ 1.24
VARS-221ENST00000463184 MAP4K1Q92918 833 aa22.77■■□□□ 1.24
VARS-221ENST00000463184 MTA3Q9BTC8 594 aa22.77■■□□□ 1.24
VARS-221ENST00000463184 SP4Q02446 784 aa22.76■■□□□ 1.23
VARS-221ENST00000463184 PTCRAQ6ISU1 281 aaPredicted RBP22.76■■□□□ 1.23
VARS-221ENST00000463184 TAF2Q6P1X5 1199 aa22.76■■□□□ 1.23
VARS-221ENST00000463184 GJD3Q8N144 294 aa22.76■■□□□ 1.23
VARS-221ENST00000463184 NEK9Q8TD19 979 aa22.76■■□□□ 1.23
VARS-221ENST00000463184 GPRASP2Q96D09 838 aa22.76■■□□□ 1.23
VARS-221ENST00000463184 CDHR1Q96JP9 859 aa22.76■■□□□ 1.23
VARS-221ENST00000463184 LY9Q9HBG7 655 aa22.76■■□□□ 1.23
VARS-221ENST00000463184 TELO2Q9Y4R8 837 aa22.76■■□□□ 1.23
VARS-221ENST00000463184 COL4A6Q14031 1691 aa22.75■■□□□ 1.23
VARS-221ENST00000463184 GRXCR2A6NFK2 248 aa22.75■■□□□ 1.23
VARS-221ENST00000463184 CHRNA1P02708 482 aa22.75■■□□□ 1.23
VARS-221ENST00000463184 CASC1Q6TDU7 716 aa22.75■■□□□ 1.23
VARS-221ENST00000463184 TMTC2Q8N394 836 aa22.75■■□□□ 1.23
VARS-221ENST00000463184 IL17RAQ96F46 866 aa22.75■■□□□ 1.23
VARS-221ENST00000463184 CCDC136Q96JN2 1154 aa22.75■■□□□ 1.23
VARS-221ENST00000463184 MYL10Q9BUA6 226 aa22.75■■□□□ 1.23
VARS-221ENST00000463184 C11orf16Q9NQ32 467 aa22.75■■□□□ 1.23
VARS-221ENST00000463184 IL9P15248 144 aa22.74■■□□□ 1.23
VARS-221ENST00000463184 TCF7P36402 384 aaPredicted RBP22.74■■□□□ 1.23
VARS-221ENST00000463184 CENPQQ7L2Z9 268 aaPredicted RBP22.74■■□□□ 1.23
VARS-221ENST00000463184 RSPH3Q86UC2 560 aa22.74■■□□□ 1.23
VARS-221ENST00000463184 FIBCD1Q8N539 461 aa22.74■■□□□ 1.23
VARS-221ENST00000463184 SEPT1Q8WYJ6 367 aa22.74■■□□□ 1.23
VARS-221ENST00000463184 PABPC5Q96DU9 382 aaKnown RBP22.74■■□□□ 1.23
VARS-221ENST00000463184 NSUN3Q9H649 340 aaKnown RBP22.74■■□□□ 1.23
VARS-221ENST00000463184 PSTPIP2Q9H939 334 aa22.74■■□□□ 1.23
VARS-221ENST00000463184 EHMT1Q9H9B1 1298 aa22.74■■□□□ 1.23
VARS-221ENST00000463184 DOCK5Q9H7D0 1870 aa22.74■■□□□ 1.23
VARS-221ENST00000463184 KAT6AQ92794 2004 aa22.74■■□□□ 1.23
VARS-221ENST00000463184 ATP9AO75110 1047 aa22.73■■□□□ 1.23
VARS-221ENST00000463184 RB1P06400 928 aa22.73■■□□□ 1.23
VARS-221ENST00000463184 TCEAL5Q5H9L2 206 aa22.73■■□□□ 1.23
VARS-221ENST00000463184 ERAP1Q9NZ08 941 aa22.73■■□□□ 1.23
VARS-221ENST00000463184 RWDD3Q9Y3V2 267 aa22.73■■□□□ 1.23
VARS-221ENST00000463184 RBM8AQ9Y5S9 174 aaKnown RBP22.73■■□□□ 1.23
VARS-221ENST00000463184 C5orf67F2Z3F1 127 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 MAFGO15525 162 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 NCK2O43639 380 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 GHRP10912 638 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 KCNA2P16389 499 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 SSTR3P32745 418 aaPredicted RBP22.72■■□□□ 1.23
VARS-221ENST00000463184 PPFIA1Q13136 1202 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 COL19A1Q14993 1142 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 NFXL1Q6ZNB6 911 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 RUFY4Q6ZNE9 571 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 SRBD1Q8N5C6 995 aaKnown RBP22.72■■□□□ 1.23
VARS-221ENST00000463184 PPP4R2Q9NY27 417 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 FAM50BQ9Y247 325 aa22.72■■□□□ 1.23
VARS-221ENST00000463184 GSTTP1A0A1W2PQM5 241 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 FAM86C2PA6NEL3 165 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 CCDC69A6NI79 296 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 H3BQ06 376 aaPredicted RBP22.71■■□□□ 1.23
VARS-221ENST00000463184 PRC1O43663 620 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 PLEKHA8P1O95397 391 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 CALM1P0DP23 149 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 CALM2P0DP24 149 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 CALM3P0DP25 149 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 ITGB5P18084 799 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 MCM5P33992 734 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 MGAT3Q09327 533 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 TMEM87BQ96K49 555 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 SMARCAD1Q9H4L7 1026 aa22.71■■□□□ 1.23
VARS-221ENST00000463184 MBLAC1A4D2B0 266 aaPredicted RBP22.7■■□□□ 1.22
VARS-221ENST00000463184 ENPP3O14638 875 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 RPLP2P05387 115 aaKnown RBP22.7■■□□□ 1.22
VARS-221ENST00000463184 ALADP13716 330 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 CTNNB1P35222 781 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 BMPR1AP36894 532 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 LPIN1Q14693 890 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 GRIK4Q16099 956 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 GLG1Q92896 1179 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 C11orf84Q9BUA3 381 aaPredicted RBP22.7■■□□□ 1.22
VARS-221ENST00000463184 LMAN2LQ9H0V9 348 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 TUBE1Q9UJT0 475 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 UBIAD1Q9Y5Z9 338 aa22.7■■□□□ 1.22
VARS-221ENST00000463184 RALGAPA2Q2PPJ7 1873 aa22.69■■□□□ 1.22
VARS-221ENST00000463184 NLRC5Q86WI3 1866 aa22.69■■□□□ 1.22
VARS-221ENST00000463184 PRR33A8MZF0 331 aa22.69■■□□□ 1.22
VARS-221ENST00000463184 SH2B2O14492 632 aaPredicted RBP22.69■■□□□ 1.22
VARS-221ENST00000463184 MARK3P27448 753 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms