RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 ZNF689Q96CS4 500 aaPredicted RBP13.53□□□□□ -0.24
PCCB-203ENST00000462542 EHMT1Q9H9B1 1298 aa13.53□□□□□ -0.24
PCCB-203ENST00000462542 CCDC171Q6TFL3 1326 aa13.53□□□□□ -0.24
PCCB-203ENST00000462542 NRCAMQ92823 1304 aa13.53□□□□□ -0.24
PCCB-203ENST00000462542 SALL3Q9BXA9 1300 aa13.53□□□□□ -0.24
PCCB-203ENST00000462542 TRIM6-TRIM34B2RNG4 842 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 GCOM1H8Y6P7 765 aaPredicted RBP13.52□□□□□ -0.25
PCCB-203ENST00000462542 LINC01565O15544 149 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 KDM4AO75164 1064 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 DGKIO75912 1065 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 CHRNA1P02708 482 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 POLR2MP0CAP2 368 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 ICAM3P32942 547 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 NUBP1P53384 320 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 ARHGAP4P98171 946 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 CAMK1Q14012 370 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 TAF2Q6P1X5 1199 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 METTL7BQ6UX53 244 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 MTMR8Q96EF0 704 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 RC3H2Q9HBD1 1191 aaKnown RBP13.52□□□□□ -0.25
PCCB-203ENST00000462542 ALG13Q9NP73 1137 aaKnown RBP13.52□□□□□ -0.25
PCCB-203ENST00000462542 ZSWIM5Q9P217 1185 aa13.52□□□□□ -0.25
PCCB-203ENST00000462542 KLRF2D3W0D1 207 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 RBAK-RBAKDNI3L0D1 243 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 ZBTB5O15062 677 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 GFRA3O60609 400 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 HOXA13P31271 388 aaPredicted RBP13.51□□□□□ -0.25
PCCB-203ENST00000462542 GTF2F1P35269 517 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCCB-203ENST00000462542 PDE1AP54750 535 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 RRP1P56182 461 aaKnown RBP13.51□□□□□ -0.25
PCCB-203ENST00000462542 SIGLEC14Q08ET2 396 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 NMIQ13287 307 aaPredicted RBP13.51□□□□□ -0.25
PCCB-203ENST00000462542 CYFIP1Q7L576 1253 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 ZNF589Q86UQ0 364 aaPredicted RBP13.51□□□□□ -0.25
PCCB-203ENST00000462542 ENAHQ8N8S7 591 aaPredicted RBP13.51□□□□□ -0.25
PCCB-203ENST00000462542 SMRP1Q8NCR6 262 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 SPPL3Q8TCT6 385 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 GPR20Q99678 358 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 CLEC1BQ9P126 229 aa13.51□□□□□ -0.25
PCCB-203ENST00000462542 ZFHX2Q9C0A1 2572 aaPredicted RBP13.5□□□□□ -0.25
PCCB-203ENST00000462542 NEDD4P46934 1319 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 FSD2A1L4K1 749 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 SPATA31C2B4DYI2 1134 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 RPLP2P05387 115 aaKnown RBP13.5□□□□□ -0.25
PCCB-203ENST00000462542 ANKRD45Q5TZF3 282 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 FAM43BQ6ZT52 329 aaPredicted RBP13.5□□□□□ -0.25
PCCB-203ENST00000462542 FCHSD1Q86WN1 690 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 CMTR2Q8IYT2 770 aaKnown RBP13.5□□□□□ -0.25
PCCB-203ENST00000462542 GIMAP8Q8ND71 665 aaPredicted RBP13.5□□□□□ -0.25
PCCB-203ENST00000462542 IL31RAQ8NI17 732 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 LMBR1Q8WVP7 490 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 GPKOWQ92917 476 aaPredicted RBP eCLIP13.5□□□□□ -0.251e-9■■■■□ 25.5
PCCB-203ENST00000462542 INPP4AQ96PE3 977 aaPredicted RBP13.5□□□□□ -0.25
PCCB-203ENST00000462542 SENP7Q9BQF6 1050 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 PHF7Q9BWX1 381 aaPredicted RBP13.5□□□□□ -0.25
PCCB-203ENST00000462542 BCAS3Q9H6U6 928 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 KAT6AQ92794 2004 aa13.5□□□□□ -0.25
PCCB-203ENST00000462542 TTC3P53804 2025 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 FIBPO43427 364 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 GHRP10912 638 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
PCCB-203ENST00000462542 AVPR2P30518 371 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 LPIN1Q14693 890 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 STAG2Q8N3U4 1231 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 ATOH1Q92858 354 aaPredicted RBP13.49□□□□□ -0.25
PCCB-203ENST00000462542 FTHL17Q9BXU8 183 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 KRT23Q9C075 422 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 CNNM2Q9H8M5 875 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 SQORQ9Y6N5 450 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 ATG2AQ2TAZ0 1938 aa13.49□□□□□ -0.25
PCCB-203ENST00000462542 PALM3A6NDB9 673 aaPredicted RBP13.48□□□□□ -0.25
PCCB-203ENST00000462542 B4E1Z4 1266 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
PCCB-203ENST00000462542 ITGB1P05556 798 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 STAG3L1P0CL83 205 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 DNAJB1P25685 340 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 NRIP1P48552 1158 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 MRPS9P82933 396 aaKnown RBP13.48□□□□□ -0.25
PCCB-203ENST00000462542 MGAT3Q09327 533 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 FBXO47Q5MNV8 452 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 IFIT1BQ5T764 474 aaKnown RBP13.48□□□□□ -0.25
PCCB-203ENST00000462542 UTP14CQ5TAP6 766 aaKnown RBP13.48□□□□□ -0.25
PCCB-203ENST00000462542 XRRA1Q6P2D8 792 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 TSHZ1Q6ZSZ6 1077 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 CRIPAKQ8N1N5 446 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 POF1BQ8WVV4 589 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
PCCB-203ENST00000462542 UBAC1Q9BSL1 405 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 TLE6Q9H808 572 aa13.48□□□□□ -0.25
PCCB-203ENST00000462542 USP15Q9Y4E8 981 aaPredicted RBP13.48□□□□□ -0.25
PCCB-203ENST00000462542 MRPL42Q9Y6G3 142 aaKnown RBP13.48□□□□□ -0.25
PCCB-203ENST00000462542 UBE3AQ05086 875 aa13.47□□□□□ -0.25
PCCB-203ENST00000462542 IER5Q5VY09 327 aa13.47□□□□□ -0.25
PCCB-203ENST00000462542 ADGRD2Q7Z7M1 963 aa13.47□□□□□ -0.25
PCCB-203ENST00000462542 NPAS4Q8IUM7 802 aa13.47□□□□□ -0.25
PCCB-203ENST00000462542 KLHL23Q8NBE8 558 aa13.47□□□□□ -0.25
PCCB-203ENST00000462542 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
PCCB-203ENST00000462542 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
PCCB-203ENST00000462542 RTEL1Q9NZ71 1219 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms