RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 GLG1Q92896 1179 aa21.06■□□□□ 0.96
CDKN1A-206ENST00000462537 IGLV3-22A0A075B6J6 115 aa21.05■□□□□ 0.96
CDKN1A-206ENST00000462537 PRR16Q569H4 304 aa21.05■□□□□ 0.96
CDKN1A-206ENST00000462537 ZNF365Q70YC5 407 aa21.05■□□□□ 0.96
CDKN1A-206ENST00000462537 RPUSD2Q8IZ73 545 aaKnown RBP21.05■□□□□ 0.96
CDKN1A-206ENST00000462537 CAGE1Q8TC20 777 aa21.05■□□□□ 0.96
CDKN1A-206ENST00000462537 CTAGE1Q96RT6 745 aa21.05■□□□□ 0.96
CDKN1A-206ENST00000462537 ZNF577Q9BSK1 485 aa21.05■□□□□ 0.96
CDKN1A-206ENST00000462537 LIMCH1Q9UPQ0 1083 aa21.05■□□□□ 0.96
CDKN1A-206ENST00000462537 SCN5AQ14524 2016 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 IPO5O00410 1097 aaKnown RBP21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 MARK3P27448 753 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 RBM25P49756 843 aaKnown RBP21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 ACTR2P61160 394 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 PTK7Q13308 1070 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 DEFB128Q7Z7B8 93 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 NSUN7Q8NE18 718 aaKnown RBP21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 TBCKQ8TEA7 893 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 AFAP1L1Q8TED9 768 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 DHX38Q92620 1227 aaKnown RBP21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 ATP6V0A1Q93050 837 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 KIF2CQ99661 725 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 PHF20Q9BVI0 1012 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 RNPEPQ9H4A4 650 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 SMARCAD1Q9H4L7 1026 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 AZI2Q9H6S1 392 aa21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 TRIP12Q14669 1992 aaPredicted RBP21.04■□□□□ 0.96
CDKN1A-206ENST00000462537 SLC34A2O95436 690 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 FGBP02675 491 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 GNAT1P11488 350 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 USP11P51784 963 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 HIC1Q14526 733 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 NONOQ15233 471 aaKnown RBP eCLIP21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 GJB4Q9NTQ9 266 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 SETD4Q9NVD3 440 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 ERAP1Q9NZ08 941 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 TCEAL9Q9UHQ7 104 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 EMSYQ7Z589 1322 aa21.03■□□□□ 0.96
CDKN1A-206ENST00000462537 CCDC194A0A1B0GVG4 234 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 IQCF3P0C7M6 154 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 FDPSP14324 419 aaKnown RBP21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 SELPP16109 830 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 CIITAP33076 1130 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 RFC2P35250 354 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 NPY5RQ15761 445 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 OTOP2Q7RTS6 562 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 KRT25Q7Z3Z0 450 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 CCDC83Q8IWF9 413 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 FTOQ9C0B1 505 aaKnown RBP eCLIP21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 MTIF3Q9H2K0 278 aaKnown RBP21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 TBC1D22BQ9NU19 505 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 LAMA3Q16787 3333 aa21.02■□□□□ 0.96
CDKN1A-206ENST00000462537 M0R2N6 131 aa21.01■□□□□ 0.95
CDKN1A-206ENST00000462537 TREHO43280 583 aa21.01■□□□□ 0.95
CDKN1A-206ENST00000462537 JAK2O60674 1132 aa21.01■□□□□ 0.95
CDKN1A-206ENST00000462537 PFKMP08237 780 aa21.01■□□□□ 0.95
CDKN1A-206ENST00000462537 CKBP12277 381 aa21.01■□□□□ 0.95
CDKN1A-206ENST00000462537 FOSBP53539 338 aa21.01■□□□□ 0.95
CDKN1A-206ENST00000462537 LRRC8DQ7L1W4 858 aa21.01■□□□□ 0.95
CDKN1A-206ENST00000462537 SERINC5Q86VE9 423 aa21.01■□□□□ 0.95
CDKN1A-206ENST00000462537 KAT6AQ92794 2004 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 ZBBXA8MT70 800 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 BACH1O14867 736 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 DHX15O43143 795 aaKnown RBP21■□□□□ 0.95
CDKN1A-206ENST00000462537 LGR5O75473 907 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 CCNE2O96020 404 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 HOXC8P31273 242 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 THPOP40225 353 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 PPFIA1Q13136 1202 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 TRIM29Q14134 588 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 RABEP1Q15276 862 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 INF2Q27J81 1249 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 LMBR1Q8WVP7 490 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 HERVK_113Q902F9 699 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 WNT8BQ93098 351 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 ZSCAN31Q96LW9 406 aaPredicted RBP21■□□□□ 0.95
CDKN1A-206ENST00000462537 PCYT2Q99447 389 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 BRMS1Q9HCU9 246 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 TRPC6Q9Y210 931 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 NRCAMQ92823 1304 aa21■□□□□ 0.95
CDKN1A-206ENST00000462537 STAT5BP51692 787 aa20.99■□□□□ 0.95
CDKN1A-206ENST00000462537 RBL2Q08999 1139 aa20.99■□□□□ 0.95
CDKN1A-206ENST00000462537 ST3GAL1Q11201 340 aa20.99■□□□□ 0.95
CDKN1A-206ENST00000462537 TRIM71Q2Q1W2 868 aaKnown RBP20.99■□□□□ 0.95
CDKN1A-206ENST00000462537 ZNF618Q5T7W0 954 aa20.99■□□□□ 0.95
CDKN1A-206ENST00000462537 FAM160B1Q5W0V3 765 aa20.99■□□□□ 0.95
CDKN1A-206ENST00000462537 GPR153Q6NV75 609 aa20.99■□□□□ 0.95
CDKN1A-206ENST00000462537 MIS18BP1Q6P0N0 1132 aa20.99■□□□□ 0.95
CDKN1A-206ENST00000462537 LENG9Q96B70 501 aa20.99■□□□□ 0.95
CDKN1A-206ENST00000462537 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 MSH4O15457 936 aa20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 EDIL3O43854 480 aa20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 ATG7O95352 703 aa20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 TDP2O95551 362 aa20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 ACTN1P12814 892 aa20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 KRT2P35908 639 aa20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 IGBP1P78318 339 aa20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 SMAD3P84022 425 aaKnown RBP20.98■□□□□ 0.95
CDKN1A-206ENST00000462537 KRT76Q01546 638 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms