RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 GIPC2Q8TF65 315 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 COL26A1Q96A83 441 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 RMDN1Q96DB5 314 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 MRPL38Q96DV4 380 aaKnown RBP7□□□□□ -1.29
SMARCC1-204ENST00000462198 TRMT13Q9NUP7 481 aaKnown RBP7□□□□□ -1.29
SMARCC1-204ENST00000462198 CLDND1Q9NY35 253 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 ADAMTS5Q9UNA0 930 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 ASTN1O14525 1302 aa7□□□□□ -1.29
SMARCC1-204ENST00000462198 DNAJC25-GNG10A0A024R161 153 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 HIP1O00291 1037 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 DYNC1LI2O43237 492 aaPredicted RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 MBTPS2O43462 519 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 MBD4O95243 580 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 CHGBP05060 677 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 GSPT1P15170 499 aaKnown RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 SDSP20132 328 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 LTBRP36941 435 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 USP5P45974 858 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 WDR5P61964 334 aaKnown RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 DYNLL1P63167 89 aaKnown RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 SIGLEC14Q08ET2 396 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 COL9A2Q14055 689 aaPredicted RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 COL19A1Q14993 1142 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 CLUL1Q15846 466 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 FSCN1Q16658 493 aaKnown RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 TTC6Q86TZ1 520 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 APPBP2Q92624 585 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 NKD2Q969F2 451 aaPredicted RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 C17orf80Q9BSJ5 609 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 CRNKL1Q9BZJ0 848 aaKnown RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 AP5M1Q9H0R1 490 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 ARMT1Q9H993 441 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 DIAPH3Q9NSV4 1193 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 SLC27A5Q9Y2P5 690 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 VPS13AQ96RL7 3174 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 PARP14Q460N5 1801 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 TNKSO95271 1327 aa6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 MAP1BP46821 2468 aaKnown RBP6.99□□□□□ -1.29
SMARCC1-204ENST00000462198 DMXL1Q9Y485 3027 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 ANKRD11Q6UB99 2663 aaPredicted RBP6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 ANKRD33BA6NCL7 494 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 VWA5AO00534 786 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 MPHOSPH10O00566 681 aaKnown RBP6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 NCK2O43639 380 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 GJB5O95377 273 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 SHMT1P34896 483 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 COPB2P35606 906 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 DEFB103AP81534 67 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 DLX2Q07687 328 aaPredicted RBP6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 FOXC1Q12948 553 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 NMIQ13287 307 aaPredicted RBP6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 BMP2KLQ5H9B9 411 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 ZMYM1Q5SVZ6 1142 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 FAM117BQ6P1L5 589 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 CWC27Q6UX04 472 aaKnown RBP6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 FRMD5Q7Z6J6 570 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 TICAM2Q86XR7 235 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 SIAH1Q8IUQ4 282 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 LCORLQ8N3X6 602 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 PLPP7Q8NBV4 271 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 ZNF592Q92610 1267 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 RIOK1Q9BRS2 568 aaKnown RBP6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 PUS7LQ9H0K6 701 aaKnown RBP6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 EHD4Q9H223 541 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 HELLSQ9NRZ9 838 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 FBXO28Q9NVF7 368 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 EGFL7Q9UHF1 273 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 ZNF214Q9UL59 606 aaPredicted RBP6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 GPSM3Q9Y4H4 160 aa6.98□□□□□ -1.29
SMARCC1-204ENST00000462198 CFAP47Q6ZTR5 3102 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 LAMA4Q16363 1823 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 A0A0D9SFI3 127 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 M0R2C6 588 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 GPAA1O43292 621 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 ADH1BP00325 375 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 APPP05067 770 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 GNAT2P19087 354 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 PTGS1P23219 599 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 PLCD1P51178 756 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 DPYDQ12882 1025 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 GPM6BQ13491 265 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 PUM1Q14671 1186 aaKnown RBP eCLIP6.97□□□□□ -1.299e-16■■■□□ 16
SMARCC1-204ENST00000462198 KMT5BQ4FZB7 885 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 MCMDC2Q4G0Z9 681 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 TIGD5Q53EQ6 642 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 CASC1Q6TDU7 716 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 ARMCX2Q7L311 632 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 RPAINQ86UA6 219 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 TLK2Q86UE8 772 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 AMOTL1Q8IY63 956 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 CCDC144CPQ8IYA2 1237 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 SDR42E1Q8WUS8 393 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 RUFY2Q8WXA3 655 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 OSBP2Q969R2 916 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 ASIC4Q96FT7 647 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 FAM227BQ96M60 508 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 STRBPQ96SI9 672 aaKnown RBP6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 SEC62Q99442 399 aaKnown RBP6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 KATNBL1Q9H079 304 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms