RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 UBAC1Q9BSL1 405 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 CNNM2Q9H8M5 875 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 SETD4Q9NVD3 440 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 RWDD3Q9Y3V2 267 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 FRMPD4Q14CM0 1322 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 KIAA1671Q9BY89 1806 aa12.58□□□□□ -0.4
CBX3-205ENST00000462165 MBTPS2O43462 519 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 STAM2O75886 525 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 CTNNB1P35222 781 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 BMPR1AP36894 532 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 MRPS9P82933 396 aaKnown RBP12.57□□□□□ -0.4
CBX3-205ENST00000462165 HYAL1Q12794 435 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 GNPTABQ3T906 1256 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 FCHSD1Q86WN1 690 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 CLP1Q92989 425 aaKnown RBP12.57□□□□□ -0.4
CBX3-205ENST00000462165 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
CBX3-205ENST00000462165 POP1Q99575 1024 aaKnown RBP12.57□□□□□ -0.4
CBX3-205ENST00000462165 GPR20Q99678 358 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 C11orf84Q9BUA3 381 aaPredicted RBP12.57□□□□□ -0.4
CBX3-205ENST00000462165 LNPKQ9C0E8 428 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 RIOX1Q9H6W3 641 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 RC3H2Q9HBD1 1191 aaKnown RBP12.57□□□□□ -0.4
CBX3-205ENST00000462165 ZNF215Q9UL58 517 aaPredicted RBP12.57□□□□□ -0.4
CBX3-205ENST00000462165 ADGRA3Q8IWK6 1321 aa12.57□□□□□ -0.4
CBX3-205ENST00000462165 DLX2Q07687 328 aaPredicted RBP12.56□□□□□ -0.4
CBX3-205ENST00000462165 SEMA3FQ13275 785 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 SLC35G1Q2M3R5 365 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 HERC4Q5GLZ8 1057 aaPredicted RBP12.56□□□□□ -0.4
CBX3-205ENST00000462165 HFE2Q6ZVN8 426 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 CYFIP1Q7L576 1253 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 HOMER1Q86YM7 354 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 MFSD14AQ96MC6 490 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 PIGSQ96S52 555 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 OSBPL3Q9H4L5 887 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 EHMT1Q9H9B1 1298 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 DIAPH3Q9NSV4 1193 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 LOXHD1Q8IVV2 1947 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 NRCAMQ92823 1304 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 TECTAO75443 2155 aa12.56□□□□□ -0.4
CBX3-205ENST00000462165 SPATA31C2B4DYI2 1134 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 HIP1O00291 1037 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 GRM6O15303 877 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 FIBPO43427 364 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 CHRNA1P02708 482 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 MMP1P03956 469 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 RRP1P56182 461 aaKnown RBP12.55□□□□□ -0.4
CBX3-205ENST00000462165 ARHGAP4P98171 946 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 MGAT3Q09327 533 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 SMAD4Q13485 552 aaKnown RBP12.55□□□□□ -0.4
CBX3-205ENST00000462165 GRM4Q14833 912 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 TRIM50Q86XT4 487 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 LMBR1Q8WVP7 490 aa12.55□□□□□ -0.4
CBX3-205ENST00000462165 ZNF689Q96CS4 500 aaPredicted RBP12.55□□□□□ -0.4
CBX3-205ENST00000462165 PNMA6FA0A0J9YX94 578 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 CYTH3O43739 400 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 TBX10O75333 385 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 GHRP10912 638 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 CLUL1Q15846 466 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 UTP14CQ5TAP6 766 aaKnown RBP12.54□□□□□ -0.4
CBX3-205ENST00000462165 TAF2Q6P1X5 1199 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 CYB5R4Q7L1T6 521 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 RNF135Q8IUD6 432 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 PLEKHM2Q8IWE5 1019 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 SMC5Q8IY18 1101 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 SENP7Q9BQF6 1050 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 PLVAPQ9BX97 442 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 MUTYHQ9UIF7 546 aa12.54□□□□□ -0.4
CBX3-205ENST00000462165 ENPP3O14638 875 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
CBX3-205ENST00000462165 ADAM15Q13444 863 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 CAMK1Q14012 370 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 BTG3Q14201 252 aaPredicted RBP12.53□□□□□ -0.4
CBX3-205ENST00000462165 LPIN1Q14693 890 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 RUFY4Q6ZNE9 571 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 BMP8AQ7Z5Y6 402 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 RSPH3Q86UC2 560 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 EDAQ92838 391 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 P2RX5Q93086 422 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 RTEL1Q9NZ71 1219 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 CD207Q9UJ71 328 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 TELO2Q9Y4R8 837 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 SUPT16HQ9Y5B9 1047 aaKnown RBP12.53□□□□□ -0.4
CBX3-205ENST00000462165 CFAP54Q96N23 3096 aa12.53□□□□□ -0.4
CBX3-205ENST00000462165 STXBP3O00186 592 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 LINC01565O15544 149 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 DGKIO75912 1065 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 EYA4O95677 639 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 NAALADL2Q58DX5 795 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 FBXO47Q5MNV8 452 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 XRRA1Q6P2D8 792 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 GIMAP8Q8ND71 665 aaPredicted RBP12.52□□□□□ -0.41
CBX3-205ENST00000462165 MSLNLQ96KJ4 702 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 IGFLR1Q9H665 355 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
CBX3-205ENST00000462165 PLAGL2Q9UPG8 496 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 KMT2EQ8IZD2 1858 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 PLXNA4Q9HCM2 1894 aa12.52□□□□□ -0.41
CBX3-205ENST00000462165 MBLAC1A4D2B0 266 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms