RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 SKIDA1Q1XH10 827 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 FIGNQ5HY92 759 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.58□□□□□ -1.68
CCDC93-204ENST00000460781 ANKLE2Q86XL3 938 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 PTRH1Q86Y79 214 aaKnown RBP4.58□□□□□ -1.68
CCDC93-204ENST00000460781 Q8N1Y9 231 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 DDX1Q92499 740 aaKnown RBP4.58□□□□□ -1.68
CCDC93-204ENST00000460781 TSPAN17Q96FV3 270 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 SCLYQ96I15 445 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 SCYL1Q96KG9 808 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 TARS2Q9BW92 718 aaKnown RBP4.58□□□□□ -1.68
CCDC93-204ENST00000460781 BOCQ9BWV1 1114 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 ARHGAP28Q9P2N2 729 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 SIT1Q9Y3P8 196 aa4.58□□□□□ -1.68
CCDC93-204ENST00000460781 CUL7Q14999 1698 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 TCAF2A6NFQ2 919 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 NOTOA8MTQ0 251 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 RFXAPO00287 272 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 SCDO00767 359 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 PEX10O60683 326 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 FARP2O94887 1054 aaPredicted RBP4.57□□□□□ -1.68
CCDC93-204ENST00000460781 NCAM1P13591 858 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 VIPR1P32241 457 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 NFKB2Q00653 900 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 IRF9Q00978 393 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 TUSC3Q13454 348 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 RGL3Q3MIN7 710 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 EMC4Q5J8M3 183 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 BTBD8Q5XKL5 378 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 MCTP1Q6DN14 999 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 PKN3Q6P5Z2 889 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 KCTD1Q719H9 257 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 OSTM1Q86WC4 334 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 AMIGO3Q86WK7 504 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 UHMK1Q8TAS1 419 aaKnown RBP4.57□□□□□ -1.68
CCDC93-204ENST00000460781 KCNN1Q92952 543 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 E2F7Q96AV8 911 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 SHISA4Q96DD7 197 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 TOE1Q96GM8 510 aaKnown RBP4.57□□□□□ -1.68
CCDC93-204ENST00000460781 TTC1Q99614 292 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 CD244Q9BZW8 370 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 RNF38Q9H0F5 515 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 SRPK3Q9UPE1 567 aa4.57□□□□□ -1.68
CCDC93-204ENST00000460781 LOC105371045A0A1W2PR82 267 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 PTPDC1A2A3K4 754 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 WNT9AO14904 365 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 GLRX3O76003 335 aaKnown RBP4.56□□□□□ -1.68
CCDC93-204ENST00000460781 HMGB1P09429 215 aaKnown RBP4.56□□□□□ -1.68
CCDC93-204ENST00000460781 CYP2C8P10632 490 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 STAT3P40763 770 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 IGBP1P78318 339 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 GRIN1Q05586 938 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 STRN3Q13033 797 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 TMEM132BQ14DG7 1078 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 PTPROQ16827 1216 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 VASNQ6EMK4 673 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 CD300LDQ6UXZ3 194 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 PRR23BQ6ZRT6 265 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 KIF18BQ86Y91 864 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 HIPK4Q8NE63 616 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 WRNIP1Q96S55 665 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 ZNF552Q9H707 407 aaPredicted RBP4.56□□□□□ -1.68
CCDC93-204ENST00000460781 SP110Q9HB58 689 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 KLHL14Q9P2G3 628 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 ASH2LQ9UBL3 628 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 CBLCQ9ULV8 474 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 RNF114Q9Y508 228 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 KIAA0586Q9BVV6 1533 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 UHRF1BP1LA0JNW5 1464 aa4.56□□□□□ -1.68
CCDC93-204ENST00000460781 TEX51A0A1B0GUA7 166 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 CBX4O00257 560 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 ARNTLO00327 626 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 KCNK3O14649 394 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 NKRFO15226 690 aaKnown RBP eCLIP4.55□□□□□ -1.68
CCDC93-204ENST00000460781 MAFGO15525 162 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 SGSM2O43147 1006 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 BRINP1O60477 761 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 PPP1R11O60927 126 aaPredicted RBP4.55□□□□□ -1.68
CCDC93-204ENST00000460781 CYP7B1O75881 506 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 KIF11P52732 1056 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 JAM2P57087 298 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 YBX1P67809 324 aaKnown RBP4.55□□□□□ -1.68
CCDC93-204ENST00000460781 LACTBP83111 547 aaPredicted RBP4.55□□□□□ -1.68
CCDC93-204ENST00000460781 KRT26Q7Z3Y9 468 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 FAM126BQ8IXS8 530 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 UBR7Q8N806 425 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 FAM84AQ96KN4 292 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 GPR101Q96P66 508 aaPredicted RBP4.55□□□□□ -1.68
CCDC93-204ENST00000460781 IFT22Q9H7X7 185 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 ACSS2Q9NR19 701 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 KCNH7Q9NS40 1196 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 TOMM22Q9NS69 142 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 THG1LQ9NWX6 298 aaKnown RBP4.55□□□□□ -1.68
CCDC93-204ENST00000460781 DTLQ9NZJ0 730 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 APOBEC2Q9Y235 224 aaKnown RBP4.55□□□□□ -1.68
CCDC93-204ENST00000460781 COL4A3BPQ9Y5P4 624 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 IRAK3Q9Y616 596 aa4.55□□□□□ -1.68
CCDC93-204ENST00000460781 EPRSP07814 1512 aaKnown RBP4.55□□□□□ -1.68
CCDC93-204ENST00000460781 KIF21BO75037 1637 aa4.54□□□□□ -1.68
CCDC93-204ENST00000460781 ZCCHC11Q5TAX3 1644 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms