RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
LSG1-204ENST00000460584 UBE2ZQ9H832 354 aaPredicted RBP13.13□□□□□ -0.31
LSG1-204ENST00000460584 RC3H2Q9HBD1 1191 aaKnown RBP13.13□□□□□ -0.31
LSG1-204ENST00000460584 RTEL1Q9NZ71 1219 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 UBIAD1Q9Y5Z9 338 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 C5orf67F2Z3F1 127 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 PRC1O43663 620 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 SORBS3O60504 671 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 LINC00271P0C7V0 271 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 ITGB5P18084 799 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 PUS10Q3MIT2 529 aaKnown RBP13.12□□□□□ -0.31
LSG1-204ENST00000460584 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 CASC1Q6TDU7 716 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 TRIM50Q86XT4 487 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 MYOCDQ8IZQ8 938 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 NEK9Q8TD19 979 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 PSTPIP2Q9H939 334 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
LSG1-204ENST00000460584 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 SQORQ9Y6N5 450 aa13.12□□□□□ -0.31
LSG1-204ENST00000460584 TCF20Q9UGU0 1960 aaKnown RBP13.12□□□□□ -0.31
LSG1-204ENST00000460584 GSTTP1A0A1W2PQM5 241 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 PI4K2BG5E9Z4 385 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 GPR37L1O60883 481 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 ATP9AO75110 1047 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 CHRNA1P02708 482 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 RB1P06400 928 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 PTPROQ16827 1216 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 TIGD5Q53EQ6 642 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 CRIPAKQ8N1N5 446 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 IFIH1Q9BYX4 1025 aaKnown RBP13.11□□□□□ -0.31
LSG1-204ENST00000460584 JADE2Q9NQC1 790 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 ERAP1Q9NZ08 941 aa13.11□□□□□ -0.31
LSG1-204ENST00000460584 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
LSG1-204ENST00000460584 SLC27A2O14975 620 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
LSG1-204ENST00000460584 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
LSG1-204ENST00000460584 MARCH8Q5T0T0 291 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 FAM117BQ6P1L5 589 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 TMTC3Q6ZXV5 915 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 FAM178BQ8IXR5 827 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 TMEM192Q8IY95 271 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 FANCBQ8NB91 859 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.1□□□□□ -0.31
LSG1-204ENST00000460584 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
LSG1-204ENST00000460584 YME1L1Q96TA2 773 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 MYL10Q9BUA6 226 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 EPHX3Q9H6B9 360 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 MTUS1Q9ULD2 1270 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 RWDD3Q9Y3V2 267 aa13.1□□□□□ -0.31
LSG1-204ENST00000460584 GRXCR2A6NFK2 248 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 RRN3P2A6NIE6 340 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 NCK2O43639 380 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 CTSHP09668 335 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 PLA2G5P39877 138 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 ARHGAP4P98171 946 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 LPIN1Q14693 890 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 TSGA10IPQ3SY00 556 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 FBXO47Q5MNV8 452 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 ZNF689Q96CS4 500 aaPredicted RBP13.09□□□□□ -0.31
LSG1-204ENST00000460584 PABPC5Q96DU9 382 aaKnown RBP13.09□□□□□ -0.31
LSG1-204ENST00000460584 IL17RAQ96F46 866 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 YTHDC1Q96MU7 727 aaKnown RBP13.09□□□□□ -0.31
LSG1-204ENST00000460584 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 LRFN3Q9BTN0 628 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 SMARCAD1Q9H4L7 1026 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 C11orf16Q9NQ32 467 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 NFASCO94856 1347 aa13.09□□□□□ -0.31
LSG1-204ENST00000460584 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 ENPP3O14638 875 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 RCAN1P53805 252 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 FUT2Q10981 343 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 PPFIA1Q13136 1202 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 GPM6BQ13491 265 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 MTMR1Q13613 665 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 GRIK4Q16099 956 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 CTC1Q2NKJ3 1217 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 UTP14CQ5TAP6 766 aaKnown RBP13.08□□□□□ -0.32
LSG1-204ENST00000460584 CREB3L3Q68CJ9 461 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 PPP1R18Q6NYC8 613 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 RUFY4Q6ZNE9 571 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 PLPPR4Q7Z2D5 763 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 ZNF713Q8N859 430 aaPredicted RBP13.08□□□□□ -0.32
LSG1-204ENST00000460584 BANK1Q8NDB2 785 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 PCYT2Q99447 389 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 NSUN3Q9H649 340 aaKnown RBP13.08□□□□□ -0.32
LSG1-204ENST00000460584 TUBE1Q9UJT0 475 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 KDM3AQ9Y4C1 1321 aa13.08□□□□□ -0.32
LSG1-204ENST00000460584 TTC3P53804 2025 aa13.07□□□□□ -0.32
LSG1-204ENST00000460584 IGKV6D-21A0A0A0MT36 114 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms