RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 TCEAL5Q5H9L2 206 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 TTC22Q5TAA0 569 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 CATIPQ7Z7H3 387 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 GIMAP8Q8ND71 665 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-227ENST00000458564 NCOA7Q8NI08 942 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 CLP1Q92989 425 aaKnown RBP12.03□□□□□ -0.48
HDLBP-227ENST00000458564 PRKAG3Q9UGI9 489 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 FAM50BQ9Y247 325 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 RWDD3Q9Y3V2 267 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 C5orf42Q9H799 3197 aa12.03□□□□□ -0.48
HDLBP-227ENST00000458564 WDFY4Q6ZS81 3184 aa12.02□□□□□ -0.48
HDLBP-227ENST00000458564 MBLAC1A4D2B0 266 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-227ENST00000458564 E7EWF7 191 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 H3BQ06 376 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-227ENST00000458564 MEIS2O14770 477 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 DDAH1O94760 285 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 UPP2O95045 317 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 CHRNA1P02708 482 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 RB1P06400 928 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 SSTR3P32745 418 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-227ENST00000458564 ANTXR2P58335 489 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 ARHGAP4P98171 946 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 PTH1RQ03431 593 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 ZP2Q05996 745 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 MGAT3Q09327 533 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 CTC1Q2NKJ3 1217 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 IGDCC4Q8TDY8 1250 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 RUFY2Q8WXA3 655 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 GPRASP2Q96D09 838 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 IL17RAQ96F46 866 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 CDHR1Q96JP9 859 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 MTA3Q9BTC8 594 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 C11orf84Q9BUA3 381 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-227ENST00000458564 LMAN2LQ9H0V9 348 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 RTEL1Q9NZ71 1219 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 TELO2Q9Y4R8 837 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 TAF6LQ9Y6J9 622 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 ADGRA3Q8IWK6 1321 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.49
HDLBP-227ENST00000458564 TRIOO75962 3097 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 MYO7AQ13402 2215 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 POTEB3A0JP26 581 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 DCXO43602 365 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 RPLP2P05387 115 aaKnown RBP12.01□□□□□ -0.49
HDLBP-227ENST00000458564 GHRP10912 638 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 KCNA2P16389 499 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 CHMLP26374 656 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 PDE4AP27815 886 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 KIF5BP33176 963 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 CTNNB1P35222 781 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 TCF7P36402 384 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-227ENST00000458564 BMPR1AP36894 532 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 UTP14CQ5TAP6 766 aaKnown RBP12.01□□□□□ -0.49
HDLBP-227ENST00000458564 USP17L6PQ6QN14 398 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 POTEBQ6S5H4 581 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 NLRX1Q86UT6 975 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 MB21D2Q8IYB1 491 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-227ENST00000458564 FIBCD1Q8N539 461 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 EXOC6Q8TAG9 804 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 SMARCC2Q8TAQ2 1214 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 CUL5Q93034 780 aa12.01□□□□□ -0.49
HDLBP-227ENST00000458564 RRP36Q96EU6 259 aaKnown RBP12.01□□□□□ -0.49
HDLBP-227ENST00000458564 SGSM2O43147 1006 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 LTBRP36941 435 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 SP4Q02446 784 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 PPFIA1Q13136 1202 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 LPIN1Q14693 890 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 FBXO47Q5MNV8 452 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 RUFY4Q6ZNE9 571 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 RSPH3Q86UC2 560 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 ADHFE1Q8IWW8 467 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 CTCFLQ8NI51 663 aaPredicted RBP12□□□□□ -0.49
HDLBP-227ENST00000458564 ZNF689Q96CS4 500 aaPredicted RBP12□□□□□ -0.49
HDLBP-227ENST00000458564 LZTS2Q9BRK4 669 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 PLVAPQ9BX97 442 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 LY9Q9HBG7 655 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 ERAP1Q9NZ08 941 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 SEC63Q9UGP8 760 aaKnown RBP12□□□□□ -0.49
HDLBP-227ENST00000458564 TUBE1Q9UJT0 475 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 DOCK5Q9H7D0 1870 aa12□□□□□ -0.49
HDLBP-227ENST00000458564 TTC3P53804 2025 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 GRM6O15303 877 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 MAFGO15525 162 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 ATP9AO75110 1047 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 MMP1P03956 469 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 ITGB5P18084 799 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 GNAQP50148 359 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 SMAD2Q15796 467 aaKnown RBP11.99□□□□□ -0.49
HDLBP-227ENST00000458564 GRIK4Q16099 956 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 MARCH8Q5T0T0 291 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 TSHZ1Q6ZSZ6 1077 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 CRIPAKQ8N1N5 446 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 PIBF1Q8WXW3 757 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 SEPT1Q8WYJ6 367 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 MAP4K1Q92918 833 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 KCNH6Q9H252 994 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 CLDND1Q9NY35 253 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms