RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CAND2O75155 1236 aa16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 HOXA13P31271 388 aaPredicted RBP16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 SP2Q02086 613 aa16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 IMMTQ16891 758 aaKnown RBP16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 IFIT1BQ5T764 474 aaKnown RBP16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 EP400NLQ6ZTU2 488 aa16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 TMEM192Q8IY95 271 aa16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 STAG2Q8N3U4 1231 aa16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 TOP1MTQ969P6 601 aa16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 PABPC5Q96DU9 382 aaKnown RBP16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 LNPKQ9C0E8 428 aa16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 TUT1Q9H6E5 874 aaKnown RBP16.65■□□□□ 0.26
UPF3AP2-201ENST00000457924 KLRF2D3W0D1 207 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 TREHO43280 583 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 UPP2O95045 317 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 SMIM10L2AP0DMW4 78 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 SMIM10L2BP0DMW5 78 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 CCND2P30279 289 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 TRAF1Q13077 416 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 CWC27Q6UX04 472 aaKnown RBP16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 ALYREFQ86V81 257 aaKnown RBP16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 NSUN3Q9H649 340 aaKnown RBP16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 CNNM2Q9H8M5 875 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 RALGAPA2Q2PPJ7 1873 aa16.64■□□□□ 0.25
UPF3AP2-201ENST00000457924 GCOM1H8Y6P7 765 aaPredicted RBP16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 NOP56O00567 594 aaKnown RBP16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 DCXO43602 365 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 PPP1R11O60927 126 aaPredicted RBP16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 LGALS2P05162 132 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 CTSHP09668 335 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 NUDT7P0C024 238 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 POLR2MP0CAP2 368 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 GNAT1P11488 350 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 HOXC8P31273 242 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 TCEAL5Q5H9L2 206 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 IL31RAQ8NI17 732 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 APBB2Q92870 758 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 MTMR8Q96EF0 704 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 USP26Q9BXU7 913 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 IFIH1Q9BYX4 1025 aaKnown RBP16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 RNPEPQ9H4A4 650 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 PRKAG3Q9UGI9 489 aa16.63■□□□□ 0.25
UPF3AP2-201ENST00000457924 COL4A6Q14031 1691 aa16.62■□□□□ 0.25
UPF3AP2-201ENST00000457924 NCK2O43639 380 aa16.62■□□□□ 0.25
UPF3AP2-201ENST00000457924 GNPTABQ3T906 1256 aa16.62■□□□□ 0.25
UPF3AP2-201ENST00000457924 FCHSD1Q86WN1 690 aa16.62■□□□□ 0.25
UPF3AP2-201ENST00000457924 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.25
UPF3AP2-201ENST00000457924 DSCC1Q9BVC3 393 aa16.62■□□□□ 0.25
UPF3AP2-201ENST00000457924 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.61■□□□□ 0.25
UPF3AP2-201ENST00000457924 HIP1O00291 1037 aa16.61■□□□□ 0.25
UPF3AP2-201ENST00000457924 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
UPF3AP2-201ENST00000457924 HOMER1Q86YM7 354 aa16.61■□□□□ 0.25
UPF3AP2-201ENST00000457924 IL17RAQ96F46 866 aa16.61■□□□□ 0.25
UPF3AP2-201ENST00000457924 CLDND1Q9NY35 253 aa16.61■□□□□ 0.25
UPF3AP2-201ENST00000457924 MAD2L2Q9UI95 211 aa16.61■□□□□ 0.25
UPF3AP2-201ENST00000457924 KAT6AQ92794 2004 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 PALM3A6NDB9 673 aaPredicted RBP16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 STAM2O75886 525 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 ZP2Q05996 745 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 NEDD9Q14511 834 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 COL19A1Q14993 1142 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 METTL7BQ6UX53 244 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 FIBCD1Q8N539 461 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 OSBPL7Q9BZF2 842 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 BCAS3Q9H6U6 928 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 SETD4Q9NVD3 440 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 ZNF215Q9UL58 517 aaPredicted RBP16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 DOCK5Q9H7D0 1870 aa16.6■□□□□ 0.25
UPF3AP2-201ENST00000457924 PIEZO1Q92508 2521 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 POTEB3A0JP26 581 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 ICAM3P32942 547 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 CTNNB1P35222 781 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 SEC23AQ15436 765 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 FAM26DQ5JW98 314 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 POTEBQ6S5H4 581 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 CYFIP1Q7L576 1253 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 RPAINQ86UA6 219 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 ADHFE1Q8IWW8 467 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 PIGSQ96S52 555 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 GPR20Q99678 358 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 KCNH6Q9H252 994 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 RWDD3Q9Y3V2 267 aa16.59■□□□□ 0.25
UPF3AP2-201ENST00000457924 BAZ2BQ9UIF8 2168 aaKnown RBP16.58■□□□□ 0.25
UPF3AP2-201ENST00000457924 MYO7AQ13402 2215 aa16.58■□□□□ 0.25
UPF3AP2-201ENST00000457924 C5orf67F2Z3F1 127 aa16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 RB1P06400 928 aa16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 ARHGAP4P98171 946 aa16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 PLEKHM2Q8IWE5 1019 aa16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 MARVELD3Q96A59 401 aa16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 C11orf84Q9BUA3 381 aaPredicted RBP16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 LMAN2LQ9H0V9 348 aa16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 OSBPL3Q9H4L5 887 aa16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 RIOX1Q9H6W3 641 aa16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.24
UPF3AP2-201ENST00000457924 NRCAMQ92823 1304 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 PNMA6FA0A0J9YX94 578 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 SPATA31C2B4DYI2 1134 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms